ltnetcase / BedAnnoLinks
Annotate genomics variations of hg19 by using a BED format database, which construct from NCBI annotation release 104
☆19Updated 2 years ago
Alternatives and similar repositories for BedAnno
Users that are interested in BedAnno are comparing it to the libraries listed below
Sorting:
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆99Updated 3 years ago
- ☆54Updated 3 years ago
- ABRA2☆95Updated 3 years ago
- An automatic classification tool for PVS1 interpretation of null variants☆43Updated last year
- This repository contains information about latest release from Genome in a Bottle project☆75Updated 6 years ago
- ☆43Updated 2 years ago
- A suite of tools for detecting expansions of short tandem repeats☆85Updated 2 years ago
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆70Updated 2 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆103Updated 5 years ago
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆99Updated last year
- Helper scripts for biological data processing from Sentieon☆64Updated 2 weeks ago
- ☆92Updated 4 years ago
- A tool for profiling long STRs from short reads☆104Updated 4 years ago
- Data and information about the Polaris study☆55Updated 6 years ago
- ExomeDepth R package for the detection of copy number variants in exomes and gene panels using high throughput DNA sequencing data.☆77Updated 7 months ago
- A copy number caller for SMN1 and SMN2 to enable SMA diagnosis and carrier screening with WGS☆51Updated 2 years ago
- Generate duplex/single consensus reads to reduce sequencing noises and remove duplications☆126Updated 2 years ago
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆83Updated 3 years ago
- Read visualizer for structural variants☆84Updated 7 years ago
- The DevNet project on github stores the PacBio DevNet website.☆115Updated 7 years ago
- A Tool for integrated Quality Control and Preprocessing on FASTQ or BAM/CRAM files☆114Updated last year
- Concordance and contamination estimator for tumor–normal pairs☆59Updated last year
- CNV screening and annotation tool☆25Updated 9 years ago
- SV detection from paired end reads mapping☆118Updated 6 years ago
- Website for checking a variant's SpliceAI, Pangolin, and other scores:☆27Updated last week
- Gene fusion detection and visualization☆131Updated 3 years ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆85Updated last month
- LoFreq Star: Sensitive variant calling from sequencing data☆110Updated 3 months ago
- Assembly Based ReAligner☆74Updated 7 years ago
- ☆36Updated 4 years ago