attractivechaos / sann
Simply feedforward neural network
☆19Updated 7 years ago
Related projects: ⓘ
- Low memory multithreaded hash table☆24Updated 9 years ago
- memory mapped multimap, multiset, and implicit interval tree based on an in-place parallel sort☆27Updated 3 years ago
- Header-only, gzread-like reader for gzip, bz2, and xz.☆12Updated 6 years ago
- Algorithms that work on generic C arrays☆10Updated 7 years ago
- libsequence: a C++ class library for evolutionary genetic analysis☆51Updated 4 years ago
- libstrbuf: A powerful string library for C☆17Updated 7 years ago
- Five implementations of double linked lists to demonstrate generic data structures in C☆15Updated 4 years ago
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆83Updated 7 months ago
- ☆14Updated 3 months ago
- ♥ Essential Functions for DNA Manipulation☆20Updated 2 months ago
- A tool for merging large BWTs☆26Updated 3 years ago
- Fast C functions for the computing the positional popcount (pospopcnt).☆52Updated 4 years ago
- A collection of string sorting algorithms☆50Updated 2 years ago
- FM-index representation of a de Bruijn graph☆27Updated 7 years ago
- Relative data structures based on the BWT☆12Updated 6 years ago
- Mantis: A Fast, Small, and Exact Large-Scale Sequence-Search Index☆80Updated 6 months ago
- Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.☆15Updated 4 years ago
- Parallel Lightweight Suffix Array Algorithm.☆17Updated 7 years ago
- An alignment-free, reference-free and incremental data structure for colored de Bruijn graph with application to pan-genome indexing.☆43Updated 2 years ago
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Updated 2 years ago
- k8 Javascript shell☆156Updated last month
- A compressed, associative, exact, and weighted dictionary for k-mers.☆83Updated 2 weeks ago
- An efficient external-memory algorithm for the construction of minimal perfect hash functions☆61Updated 3 months ago
- Optimization of a Haplotype PairHMM class for GPU processing☆24Updated 7 years ago
- Bit packed vector of integral values☆25Updated last year
- Source code for the Shifted Hamming Distance (SHD) filtering mechanism for sequence alignment. Described in the Bioinformatics journal pa…☆30Updated 4 years ago
- Parallel Block GZIP☆49Updated 8 years ago
- Run-length compressed BWT with LZ77 sampled suffix array☆10Updated 2 years ago
- Generic hash table library in C☆19Updated 4 months ago
- An exploratory implementation of bit overloads of the C++ standard algorithms☆18Updated 3 years ago