Alternatives and similar repositories for CoMW

Users that are interested in CoMW are comparing it to the libraries listed below

• hildebra / lotus2
  Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.
  ☆54Updated last month
• medema-group / BiG-MAP
  ☆31Updated 2 weeks ago
• nselem / corason
  Bioinformatic Tools for study Evolution of metabolic diversity
  ☆34Updated last year
• victoriapascal / gutsmash
  gutSMASH
  ☆55Updated 6 months ago
• steineggerlab / ufcg
  UFCG: Universal Fungal Core Genes
  ☆34Updated 5 months ago
• nvelden / geneviewer
  An R package designed for drawing gene arrow maps
  ☆83Updated last week
• GenomicsAotearoa / metagenomics_summer_school
  Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber
  ☆61Updated 10 months ago
• kelwyres / Bactabolize
  ☆39Updated last month
• rki-mf1 / clean
  A nextflow pipeline for decontamination of short reads, long reads and contigs
  ☆48Updated 2 weeks ago
• Kalan-Lab / zol
  zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
  ☆59Updated this week
• weisberglab / beav
  BEAV: Bacterial Element Annotation reVamped
  ☆66Updated 8 months ago
• blekhmanlab / biomehorizon
  Plot microbiome time series in parallel
  ☆26Updated last year
• PedroMTQ / mantis
  A package to annotate protein sequences
  ☆59Updated 4 months ago
• EBI-Metagenomics / mettannotator
  ☆72Updated this week
• stajichlab / AAFTF
  Automatic Assembly For The Fungi
  ☆23Updated 5 months ago
• cjneely10 / MetaSanity
  Pipeline for major biological analyses.
  ☆35Updated 3 years ago
• iquasere / KEGGCharter
  A tool for representing genomic potential and transcriptomic expression into KEGG pathways
  ☆59Updated 11 months ago
• segrelab / MiCoNE
  The Microbial Co-occurrence Network Explorer
  ☆21Updated last year
• acvill / bracken_plot
  A Shiny app for taxonomic abundance visualization
  ☆7Updated last year
• xiaoli-dong / metaerg
  ☆41Updated 4 years ago
• ohmeta / metapi
  A general metagenomics data mining system focus on robust microbiome research
  ☆57Updated 10 months ago
• metageni / SUPER-FOCUS
  A tool for agile functional analysis of shotgun metagenomic data
  ☆24Updated 10 months ago
• donia-lab / MetaBGC
  A metagenomic strategy for harnessing the chemical repertoire of the human microbiome
  ☆33Updated last month
• jarojasva / HADEG
  Repository of sequences to annotate hydrocarbon-degrading genes/proteins from genomes/metagenomes
  ☆11Updated last year
• nf-core / bacass
  Simple bacterial assembly and annotation pipeline
  ☆75Updated last week
• rotheconrad / KEGGDecoder-binder
  metabolic heatmap
  ☆20Updated 6 years ago
• bhattlab / bhattlab_workflows
  Computational workflows for metagenomics tasks, by the Bhatt lab
  ☆47Updated 2 years ago
• ohlab / GRiD
  Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at …
  ☆32Updated 5 years ago
• BigDataBiology / argNorm
  ARG normalization by mapping to the ARO ontology.
  ☆58Updated this week
• mtisza1 / Cenote-Taker3
  Discover and annotate the virome
  ☆44Updated 2 weeks ago