YuLab-SMU / plotting-tree-with-data-using-ggtreeExtra
☆24Updated 3 years ago
Alternatives and similar repositories for plotting-tree-with-data-using-ggtreeExtra:
Users that are interested in plotting-tree-with-data-using-ggtreeExtra are comparing it to the libraries listed below
- A shiny package for microbiome functional enrichment analysis☆37Updated 4 months ago
- Evolutionary Transcriptomics with R☆42Updated last week
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆16Updated 9 months ago
- Visualization tool for genetic reassortment☆21Updated 4 months ago
- A set of R functions that help faciliate a lot of tedious processing☆18Updated 6 years ago
- High throughput sequencing -- Amplicon sequencing, mainly include 16S, 18S and ITS for microbiome analysis☆15Updated 2 years ago
- ggtree version of plotTree.R☆18Updated 6 years ago
- ☆29Updated this week
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.☆27Updated 2 years ago
- Tao Yan's Plot Toolkit☆11Updated 5 years ago
- ☆15Updated 7 years ago
- ☆10Updated 4 years ago
- Guangchuang Yu's CV☆45Updated 2 months ago
- A microbial profiling framework for metagenomic analysis☆24Updated 4 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 2 years ago
- A program for degenerate primer design for broad taxonomic-range PCR for microbial ecology studies☆30Updated last year
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…☆33Updated 3 years ago
- Perform GWAS with gemma in a simple pipeline☆25Updated 2 years ago
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24Updated 5 years ago
- Reproducible Analyses accompanying DADA2 + PacBio Manuscript☆32Updated 4 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 2 months ago
- Genome-wide de novo genotyping with 2bRAD☆22Updated 4 months ago
- DensityMap is perl tool for the visualization of features density along chromosomes☆17Updated 2 years ago
- Ying's tools for analysis, with particular focus on microbiome data☆41Updated last month
- Repository of common bioinformatics scripts☆39Updated 3 years ago
- Rank-based Gene Ontology analysis of gene expression data☆40Updated 2 years ago
- web documentation for Trinotate☆48Updated 2 years ago
- Schloss Lab Tools for Reproducible Microbiome Research 💩☆30Updated last year