kristinbranson / JAABALinks
Janelia Animal Behavior Detector
☆81Updated last month
Alternatives and similar repositories for JAABA
Users that are interested in JAABA are comparing it to the libraries listed below
Sorting:
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆60Updated 2 years ago
- Sample implementation of the MotionMapper behavioral analysis algorithms☆81Updated 5 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆52Updated 4 months ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- Tools to work with Allen Inst CCF data in matlab☆142Updated 3 months ago
- Free, platform independent, behavior tracking software.☆139Updated 4 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated this week
- SpikeGLX recording system GUI [Neuropixels NI]☆98Updated this week
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 9 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆178Updated 3 months ago
- Histology processing☆71Updated last month
- "Approaches to Study Neural Circuits" course☆66Updated 10 months ago
- A modular package to control stimulation and track behaviour☆47Updated 11 months ago
- ☆52Updated last year
- IBL core shared libraries☆63Updated last week
- Various scripts to support deeplabcut and what to do afterwards!☆156Updated 4 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆109Updated 3 weeks ago
- Algorithm for automated source extraction from 1P data☆22Updated 2 years ago
- Registration of cells across sessions.☆75Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆78Updated 6 months ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated 2 weeks ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆201Updated last year
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆193Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆152Updated 2 weeks ago
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- ☆24Updated 5 years ago