kristinbranson / JAABA
Janelia Animal Behavior Detector
☆79Updated last month
Alternatives and similar repositories for JAABA:
Users that are interested in JAABA are comparing it to the libraries listed below
- Sample implementation of the MotionMapper behavioral analysis algorithms☆76Updated 4 years ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 2 months ago
- Free, platform independent, behavior tracking software.☆126Updated 9 months ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆54Updated last year
- Demo code for CAPTURE and DANNCE☆28Updated 3 years ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆50Updated 2 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 5 months ago
- miniscope analysis pipeline with interactive visualizations☆92Updated 8 months ago
- Animal Part Tracker☆79Updated this week
- Fiber Photometry Modular Analysis Tool Suite☆37Updated 3 years ago
- R Scripts to analyze deep lab cut point data and related data☆66Updated 2 years ago
- ☆51Updated 7 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated 3 weeks ago
- ☆26Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 6 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆86Updated this week
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆59Updated 9 months ago
- Registration of cells across sessions.☆74Updated 7 months ago
- "Approaches to Study Neural Circuits" course☆65Updated 3 months ago
- Tools to work with Allen Inst CCF data in matlab☆130Updated last year
- Algorithm for automated source extraction from 1P data☆21Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Fiber photometry analysis☆22Updated 3 months ago
- ☆22Updated 5 years ago
- A Deeplabcut network trained to label mice in open field arena with topdown view☆11Updated 4 years ago
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- WIP: Python port of Kilosort2☆50Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆99Updated 3 months ago