Janelia Animal Behavior Detector
☆83Jul 19, 2026Updated last week
Alternatives and similar repositories for JAABA
Users that are interested in JAABA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Animal Part Tracker☆89Updated this week
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Jun 18, 2020Updated 6 years ago
- ☆125Jul 4, 2026Updated 3 weeks ago
- ☆32Jun 6, 2019Updated 7 years ago
- FreiPose: A Deep Learning Framework for Precise Animal Motion Capture in 3D Spaces☆18Apr 11, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Example datasets for DeepPoseKit☆10Nov 10, 2019Updated 6 years ago
- Mouse grooming neural network training and inference code for single mice in open field assays.☆10Mar 29, 2021Updated 5 years ago
- Accompanying code for Aljadeff et al., 'Analysis of Neuronal Spike Trains, Deconstructed', Neuron (2016)☆11Jul 25, 2016Updated 10 years ago
- A Lightning app for animal pose estimation.☆26Jan 15, 2026Updated 6 months ago
- Facemap: Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also incl…☆199Jan 26, 2026Updated 6 months ago
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆23Jul 14, 2026Updated last week
- Repository for BehaviorDEPOT pipeline app files and source code☆43Jul 9, 2026Updated 2 weeks ago
- ☆29Oct 22, 2025Updated 9 months ago
- Optical projection tomography microscope for isotropic whole-brain imaging☆16Jan 27, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A gui for browsing joint calcium imaging + behavioral data.☆57Jan 22, 2025Updated last year
- Detection of Objects and tracking Research Interactive Software☆16Apr 7, 2026Updated 3 months ago
- LEAP is now deprecated -- check out its successor SLEAP!☆212Jun 1, 2020Updated 6 years ago
- A plugin for open-ephys enabling the insertion of Cython into the open-ephys signal chain.☆11Dec 22, 2021Updated 4 years ago
- deep learning for acoustic signals☆22Apr 10, 2026Updated 3 months ago
- The Browsable Atlas of Behavior-Anatomy Maps (BABAM) is a GUI for exploring hypotheses of correlations between neural activity in regions…☆13May 17, 2023Updated 3 years ago
- NWB extension to store pose estimation data☆17Jul 18, 2026Updated last week
- Distributed behavioral experiments☆94Feb 19, 2025Updated last year
- Sample implementation of the MotionMapper behavioral analysis algorithms☆82Sep 8, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and…☆75Sep 26, 2023Updated 2 years ago
- cell detection in calcium imaging recordings☆463Jul 1, 2026Updated 3 weeks ago
- a toolkit for pose estimation using deep learning☆405Jul 7, 2022Updated 4 years ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Oct 22, 2024Updated last year
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆365Updated this week
- Fast, volumetric cell detection. In development.☆24Jul 10, 2026Updated 2 weeks ago
- ☆21Nov 28, 2023Updated 2 years ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆201Oct 3, 2024Updated last year
- Extract regions of interest based on correlated pixel intensity☆24May 9, 2017Updated 9 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Automated 3D cell detection in very large images☆230Updated this week
- An R toolbox for analysing movement across space and time☆11Jun 29, 2026Updated 3 weeks ago
- live, low-latency markerless multi-camera 3D animal tracking system☆65Feb 8, 2026Updated 5 months ago
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆215Feb 9, 2024Updated 2 years ago
- Collaborative Brain Wave Analysis Pipeline (Cobrawap)☆28Sep 25, 2025Updated 10 months ago
- Fiber Photometry Modular Analysis Tool Suite☆44Jul 26, 2021Updated 5 years ago
- Free, platform independent, behavior tracking software.☆147Jun 20, 2025Updated last year