gordonberman / MotionMapperLinks
Sample implementation of the MotionMapper behavioral analysis algorithms
☆81Updated 5 years ago
Alternatives and similar repositories for MotionMapper
Users that are interested in MotionMapper are comparing it to the libraries listed below
Sorting:
- Janelia Animal Behavior Detector☆81Updated 2 weeks ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆61Updated 2 years ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆52Updated 5 months ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆33Updated 5 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆179Updated 3 months ago
- Various scripts to support deeplabcut and what to do afterwards!☆156Updated 4 months ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆195Updated last year
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Animal Part Tracker☆85Updated this week
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆202Updated last year
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆32Updated last year
- a module for kinematic analysis of deeplabcut outputs☆144Updated last year
- Tools to work with Allen Inst CCF data in matlab☆142Updated 4 months ago
- Histology processing☆71Updated 2 months ago
- Free, platform independent, behavior tracking software.☆142Updated 4 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆156Updated last month
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆35Updated 4 years ago
- ☆52Updated last year
- A modular package to control stimulation and track behaviour☆47Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆110Updated last month
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 9 months ago
- ☆24Updated 5 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- Registration of cells across sessions.☆75Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- ☆115Updated 3 months ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆78Updated 2 weeks ago
- "Approaches to Study Neural Circuits" course☆65Updated 11 months ago