Alternatives and similar repositories for MotionMapper

Users that are interested in MotionMapper are comparing it to the libraries listed below

• SchwarzNeuroconLab / DeepLabStream
  Closed-loop behavioral experiment toolkit using pose estimation of body parts.
  ☆61Updated 2 years ago
• kristinbranson / JAABA
  Janelia Animal Behavior Detector
  ☆82Updated last month
• jessedmarshall / CAPTURE_demo
  Demo code for CAPTURE and DANNCE
  ☆29Updated 4 years ago
• bonsai-rx / deeplabcut
  A Bonsai interface for real-time markerless pose estimation using DeepLabCut
  ☆53Updated 6 months ago
• YttriLab / B-SOID
  Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…
  ☆203Updated last year
• bermanlabemory / motionmapperpy
  Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)
  ☆33Updated 6 months ago
• AdaptiveMotorControlLab / DLC2Kinematics
  a module for kinematic analysis of deeplabcut outputs
  ☆148Updated 2 years ago
• DeepLabCut / DLCutils
  Various scripts to support deeplabcut and what to do afterwards!
  ☆158Updated 5 months ago
• LINCellularNeuroscience / VAME
  Variational Animal Motion Embedding - A tool for time series embedding and clustering
  ☆198Updated last year
• murthylab / GLMHMM
  ☆24Updated 5 years ago
• ETHZ-INS / DLCAnalyzer
  R Scripts to analyze deep lab cut point data and related data
  ☆70Updated 2 years ago
• MouseLand / facemap
  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…
  ☆181Updated 5 months ago
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆111Updated 2 months ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆96Updated last year
• denisecailab / ezTrack
  Free, platform independent, behavior tracking software.
  ☆143Updated 6 months ago
• LernerLab / GuPPy
  Guided Photometry Analysis in Python, a free and open-source FP analysis tool.
  ☆82Updated last week
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆156Updated last month
• Whitlock-Group / HERBS
  ☆52Updated last year
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆54Updated 11 months ago
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆143Updated 5 months ago
• kristinbranson / APT
  Animal Part Tracker
  ☆85Updated this week
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated last year
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆50Updated 4 months ago
• themattinthehatt / behavenet
  Toolbox for analyzing behavioral videos and neural activity
  ☆59Updated 2 years ago
• aarac / DeepBehavior
  ☆32Updated 6 years ago
• zebrain-lab / Toolbox-Romano-et-al
  Computational toolbox for analysis of calcium imaging data of neuronal populations
  ☆33Updated 2 years ago
• LorenFrankLab / spyglass
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
  ☆106Updated last week
• EthoML / VAME
  Variational Animal Motion Embedding - A tool for time series embedding and clustering
  ☆39Updated 3 months ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated last year
• petersaj / AP_histology
  Histology processing
  ☆71Updated last week