gordonberman / MotionMapperLinks
Sample implementation of the MotionMapper behavioral analysis algorithms
☆80Updated 4 years ago
Alternatives and similar repositories for MotionMapper
Users that are interested in MotionMapper are comparing it to the libraries listed below
Sorting:
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆60Updated 2 years ago
- Janelia Animal Behavior Detector☆81Updated 2 weeks ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆51Updated 2 months ago
- Demo code for CAPTURE and DANNCE☆29Updated 4 years ago
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆29Updated last month
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆200Updated last year
- a module for kinematic analysis of deeplabcut outputs☆141Updated last year
- Animal Part Tracker☆82Updated this week
- Various scripts to support deeplabcut and what to do afterwards!☆155Updated last month
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆173Updated 2 weeks ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆193Updated 10 months ago
- R Scripts to analyze deep lab cut point data and related data☆67Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Free, platform independent, behavior tracking software.☆138Updated last month
- A tool for drawing ROIs on videos and analysing deeplabcut videos.☆33Updated 4 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆150Updated this week
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆104Updated 7 months ago
- A modular package to control stimulation and track behaviour☆46Updated 9 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆52Updated 6 months ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated last week
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 10 months ago
- ☆32Updated 6 years ago
- ☆23Updated 5 years ago
- Histology processing☆67Updated 3 weeks ago
- Tools to work with Allen Inst CCF data in matlab☆138Updated 3 weeks ago
- ☆93Updated 2 weeks ago
- "Approaches to Study Neural Circuits" course☆66Updated 7 months ago
- ☆52Updated 11 months ago
- Registration of cells across sessions.☆75Updated 11 months ago
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆33Updated last year