PYangLab / PhosRLinks
PhosR is a package for the comprehensive analysis of phosphoproteomic data.
☆17Updated 3 months ago
Alternatives and similar repositories for PhosR
Users that are interested in PhosR are comparing it to the libraries listed below
Sorting:
- A Comprehensive R Package For Analyzing Quantitative Phosphoproteomics Data☆13Updated 3 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆63Updated 3 weeks ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆99Updated 4 months ago
- R package for analysing proteomics data☆50Updated 2 years ago
- Differential Expression Analysis tool box R lang package for omics data☆47Updated 2 weeks ago
- MeSH Enrichment and Semantic analyses☆12Updated last week
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 8 months ago
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated 2 weeks ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- tidymass☆59Updated 3 months ago
- Shiny app for making and annotating Volcano plots☆25Updated 3 weeks ago
- The repo for LFQ-Analyst☆30Updated last year
- An r package for proteomics data Analysis, developed from DEP.☆33Updated 9 months ago
- Mass spectrometry imaging toolbox☆66Updated last month
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆37Updated 2 weeks ago
- Workflow for single-cell RNA-seq analysis using Seurat☆47Updated last year
- Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.☆25Updated last week
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆83Updated 2 years ago
- R package - MSstats☆88Updated 2 months ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆30Updated last year
- Robust statistical inference for quantitative LC-MS proteomics☆33Updated 3 years ago
- Methods for label-free mass spectrometry proteomics☆15Updated 9 months ago
- Docker for MetaboAnalyst 4.0☆24Updated 5 years ago
- DEP package☆30Updated 3 years ago
- CAusal Reasoning for Network Identification with integer VALue programming in R☆61Updated 2 years ago
- ☆18Updated last month
- R-Shiny GUI integrated with the MSstats package family☆18Updated this week
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆50Updated 4 months ago
- Tools for manipulating annotated data matrices☆92Updated 4 years ago
- LIMMA (an empirical Bayes method) pipeline for two group comparison in a proteomic experiment☆29Updated 2 years ago