PYangLab / PhosR
PhosR is a package for the comprehensive analysis of phosphoproteomic data.
☆14Updated 3 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for PhosR
- A Comprehensive R Package For Analyzing Quantitative Phosphoproteomics Data☆12Updated last year
- A tool for large scale omics datasets evaluation☆24Updated last year
- An S3 data object and framework for common quantitative proteomic analyses☆36Updated last month
- R package for analysing proteomics data☆48Updated last year
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆58Updated 4 months ago
- The repo for LFQ-Analyst☆28Updated 3 months ago
- Methods for label-free mass spectrometry proteomics☆14Updated 11 months ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆33Updated 2 weeks ago
- A tiny cell atlas for commonly sequenced organisms.☆26Updated 4 months ago
- Genoppi: an open-source software for robust and standardized integration of proteomic and genetic data☆27Updated 6 months ago
- R package for Pathway RespOnsive GENe activity inference☆93Updated last year
- DEP package☆27Updated 2 years ago
- ConsensusTME Gene Sets and R Script☆39Updated 5 months ago
- LIMMA (an empirical Bayes method) pipeline for two group comparison in a proteomic experiment☆25Updated last year
- R package containing the Cerebro application.☆40Updated 3 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆42Updated last year
- collection of notebooks with different cytoscape workflows☆48Updated last year
- Proteomics Toolset for Integrative Data Analysis☆22Updated last year
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated last year
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆75Updated last year
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆31Updated last year
- ☆48Updated 4 months ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆88Updated last year
- DEqMS is a tool for quantitative proteomic analysis☆22Updated 4 years ago
- Easy and comprehensive biological network reconstruction and analysis☆24Updated last month
- Imputation of missing values of a matrix or data.frame using iterative prediction model☆31Updated last month
- Junction centric alternative splicing translator☆19Updated 2 years ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆22Updated 2 weeks ago
- Tools for manipulating annotated data matrices☆85Updated 3 years ago
- An R toolkit for estimation of cell composition from bulk expression data☆68Updated 3 years ago