meganlsmith / phyloGANView external linksLinks
phyloGAN is a Generative Adversarial Network (GAN) that infers phylognetic relationships.
☆11Jul 8, 2024Updated last year
Alternatives and similar repositories for phyloGAN
Users that are interested in phyloGAN are comparing it to the libraries listed below
Sorting:
- Phylogenetic Network Inference without ILS☆19Jul 31, 2022Updated 3 years ago
- ☆22Oct 31, 2025Updated 3 months ago
- ☆18Dec 8, 2021Updated 4 years ago
- A birth-death-hybridization based phylogenetic network simulator.☆11Oct 2, 2024Updated last year
- ☆15Nov 24, 2025Updated 2 months ago
- cobraa (coalescent based reconstruction of ancient admixture): a hidden Markov model to infer ghost admixture using just a diploid sequen…☆23Jun 17, 2025Updated 7 months ago
- Workflow to detect and phase hybrids in target capture data☆20Mar 9, 2023Updated 2 years ago
- Bash scripts for analysis of Hyb-Seq data (from raw reads to species trees/networks)☆20Nov 26, 2025Updated 2 months ago
- ☆44Sep 5, 2023Updated 2 years ago
- spruceup☆25Aug 15, 2025Updated 6 months ago
- Phylogenetic inference using Stan☆23Mar 6, 2025Updated 11 months ago
- Bayesian analysis of genomic sequence data under the multispecies coalescent model☆111Updated this week
- ☆26Apr 14, 2021Updated 4 years ago
- Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language☆79Updated this week
- ☆33Jan 14, 2026Updated last month
- Detection and classification selective sweep use domain adaptive model☆10Apr 29, 2024Updated last year
- SimPhy: A comprehensive simulator of gene family evolution☆33Jun 30, 2023Updated 2 years ago
- Accurate Species Tree EstimatoR: a family of optimation algorithms for species tree inference (including ASTRAL & CASTER)☆225Jan 4, 2026Updated last month
- G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …☆34Apr 27, 2021Updated 4 years ago
- Fast and accurate Phylogeny estimation with self-attention Networks☆42Apr 19, 2025Updated 9 months ago
- PaNeV: an R package for a pathway-based network visualization☆10Aug 25, 2025Updated 5 months ago
- INTEND (IntegratioN of Transcriptomic and EpigeNomic Data), a novel algorithm for integrating gene expression and DNA methylation dataset …☆12Dec 12, 2022Updated 3 years ago
- Package for species delimitation analysis☆11Jan 7, 2025Updated last year
- Sparse Convolutional Denoising Autoencoders for Genotype Imputation☆13Aug 23, 2019Updated 6 years ago
- A python tool for rapidly assessing the monophyly of user-defined groups in phylogenetic trees.☆10Apr 25, 2024Updated last year
- A loose collections of functions to prepare plots in R☆11Nov 17, 2017Updated 8 years ago
- A transformer model to predict pathogenic mutations☆12Jun 25, 2025Updated 7 months ago
- A tool for divide-and-conquer tree estimation via a shared distance matrix☆10Mar 19, 2019Updated 6 years ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 2 years ago
- PhyloNetworks: a julia package with utilities for phylogenetic networks☆170Dec 10, 2025Updated 2 months ago
- A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis☆10Jan 30, 2016Updated 10 years ago
- COmpositional Zero-Inflated Network Estimation☆11Nov 20, 2023Updated 2 years ago
- accessory functions for processing microbial community data☆12Dec 24, 2022Updated 3 years ago
- Faster multispecies coalescent inference using multilocus data☆14Aug 13, 2023Updated 2 years ago
- Screening Historical Events of Recombination in a Phylogeny via Ancestral Sequences☆10Sep 3, 2025Updated 5 months ago
- Fitting latent factor mixed models☆13Jun 12, 2020Updated 5 years ago
- ☆12Sep 14, 2025Updated 5 months ago
- Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction☆11Sep 29, 2014Updated 11 years ago
- ☆13May 13, 2024Updated last year