Deep learning based imputation of RNA secondary structure profile.
☆15May 1, 2022Updated 3 years ago
Alternatives and similar repositories for StructureImpute
Users that are interested in StructureImpute are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆66Jul 17, 2024Updated last year
- ☆12Feb 6, 2026Updated last month
- ☆10May 4, 2022Updated 3 years ago
- ☆15Sep 20, 2022Updated 3 years ago
- ☆10Jun 14, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Scripts for plotting figures and running analysis throughout the manuscript☆11Nov 2, 2021Updated 4 years ago
- SHAPE-guided RNA structural homology search☆12Aug 12, 2025Updated 7 months ago
- ☆13Jun 5, 2024Updated last year
- ECCV2020_Spatial Hierarchy Aware Residual Pyramid Network for Time-of-Flight Depth Denoising☆12Sep 24, 2020Updated 5 years ago
- Error-controlled interaction discovery in machine learning models☆21Jun 24, 2025Updated 9 months ago
- Quantitative analysis of native tRNA populations using direct RNA nanopore sequencing (Lucas*, Pryszcz* et al., Nat Biotech 2023)☆16Sep 19, 2024Updated last year
- Scripts to perform active learning as described in the referenced article.☆13Sep 17, 2025Updated 6 months ago
- ESfP: Event-based Shape from Polarization (CVPR 2023)☆18May 9, 2023Updated 2 years ago
- A fast and accurate RNA secondary structure, end-to-end approach prediction method.☆12Jan 2, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.io☆14Nov 3, 2022Updated 3 years ago
- The Github Page with some of the information pertaining to the YouTube videos.☆14Mar 2, 2021Updated 5 years ago
- GFF3 format with miRNA and isomiR information from sequencing data☆16Aug 5, 2019Updated 6 years ago
- S2F: protein function without experiments☆16Nov 24, 2025Updated 4 months ago
- [INFFUS 2024] Adaptive Pixel Aggregation for Joint Spatial and Angular Super-Resolution of Light Field Images☆10Sep 12, 2024Updated last year
- ☆16Aug 1, 2022Updated 3 years ago
- ☆11Apr 2, 2024Updated last year
- ☆17Mar 11, 2018Updated 8 years ago
- ☆12Mar 23, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Draw RNA secondary structures in python.☆52Jun 24, 2025Updated 9 months ago
- RNA editing quantification in deep transcriptome data☆16Jul 17, 2025Updated 8 months ago
- off-targeting assessment of Cas9 gRNAs☆15Apr 27, 2021Updated 4 years ago
- structRFM: A fully open structure-guided RNA foundation model for robust structural and functional inference☆33Jan 25, 2026Updated 2 months ago
- Package to Score Sequences using Rule Set 3☆15Nov 10, 2025Updated 4 months ago
- Code accompanying the paper "Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively…☆12Aug 26, 2021Updated 4 years ago
- Interpretable splicing model☆23Jun 14, 2023Updated 2 years ago
- SQL-like query language for the SAM/BAM file format☆29Sep 20, 2023Updated 2 years ago
- Super-fast and accurate demultiplexing of direct RNA-seq runs.☆20Jul 22, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆16Oct 19, 2024Updated last year
- MEME: Generating RNN Model Explanations via Model Extraction☆14Jan 7, 2021Updated 5 years ago
- Samwell: a python package for using genomic files... well☆20Jun 28, 2022Updated 3 years ago
- Single-sequence and Profile-based Prediction of RNA Solvent Accessibility Using Dilated Convolution Neural Network☆13Jun 22, 2022Updated 3 years ago
- Biochemical-free enrichment or depletion of RNA classes in real-time during direct RNA sequencing☆15Aug 27, 2025Updated 7 months ago
- command lines tool to annotate miRNAs with a standard mirna/isomir naming☆19Apr 24, 2025Updated 11 months ago
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆24Sep 12, 2025Updated 6 months ago