Tsinghua-gongjing / StructureImpute

Related projects ⓘ

Alternatives and complementary repositories for StructureImpute

• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆34Updated 2 years ago
• mhorlacher / rbpnet
  ☆16Updated 7 months ago
• ntranoslab / esm-variants
  ☆66Updated last year
• epigen / KPNN
  Knowledge-primed neural networks
  ☆34Updated last year
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆44Updated 2 months ago
• ShenLab / gMVP
  ☆20Updated last year
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆62Updated last year
• autosome-ru / LegNet
  accurate prediction of promoter activity and variant effects from massive parallel reporter assays
  ☆28Updated 3 weeks ago
• ctokheim / deepDegron
  Deep learning model to predict degron sequences
  ☆18Updated last year
• moss-lab / ScanFold
  ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…
  ☆16Updated 2 years ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆83Updated last year
• xinyu-dev / igblast
  Detailed explanation on how to setup database for NCBI IgBlast executable, and using it in Python
  ☆28Updated 2 years ago
• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆23Updated 7 months ago
• vagarwal87 / Xpresso
  Predicting gene expression levels from genomic sequences
  ☆50Updated 4 years ago
• KarchinLab / mhcnuggets
  MHC Class I and Class II neoantigen binding prediction
  ☆26Updated last year
• idrblab / AnnoPRO
  Feature map and function annotation of Proteins
  ☆30Updated 5 months ago
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆76Updated 2 years ago
• Tsedao / MultiRM
  [Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely …
  ☆29Updated 3 years ago
• KarchinLab / bigmhc
  BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity
  ☆46Updated 6 months ago
• OATML / EVE
  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…
  ☆60Updated 2 years ago
• hendrixlab / bpRNA
  bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure
  ☆43Updated 11 months ago
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆35Updated 2 weeks ago
• bioinformatics-sannio / ncrna-deep
  Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"
  ☆11Updated 3 years ago
• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆33Updated last month
• welch-lab / PerturbNet
  PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation
  ☆29Updated this week
• sinc-lab / miRe2e
  ☆14Updated last year
• pjsample / human_5utr_modeling
  Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.
  ☆43Updated 5 years ago
• smolkelab / promoter_design
  Promoter activity measurement and modeling; artificial promoter design and testing
  ☆12Updated last year
• TattaBio / DGEB
  Diverse Genomic Embedding Benchmark
  ☆37Updated last month
• GreiffLab / immuneSIM
  ☆38Updated 11 months ago