Tsinghua-gongjing / StructureImputeLinks
Deep learning based imputation of RNA secondary structure profile.
☆13Updated 3 years ago
Alternatives and similar repositories for StructureImpute
Users that are interested in StructureImpute are comparing it to the libraries listed below
Sorting:
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Updated 2 years ago
- Knowledge-primed neural networks☆37Updated 2 years ago
- accurate prediction of promoter activity and variant effects from massive parallel reporter assays☆36Updated last month
- ☆14Updated last year
- ☆21Updated 2 years ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆66Updated 2 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆68Updated 2 years ago
- ☆18Updated last year
- HLA-II ligand predictor.☆43Updated 2 years ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆47Updated 5 years ago
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆19Updated 11 months ago
- GraphPart, a data partitioning method for ML on biological sequences☆27Updated last year
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆38Updated this week
- GraphProt: modelling binding preferences of RNA-binding proteins☆21Updated 6 years ago
- Detailed explanation on how to setup database for NCBI IgBlast executable, and using it in Python☆28Updated 2 years ago
- ☆34Updated last month
- ☆18Updated last year
- Deep Learning the T Cell Receptor Binding Specificity of Neoantigen☆80Updated 2 years ago
- Scripts and datasets to reproduce the experiment of the paper "Exploring non-coding RNA functions with deep learning tools"☆15Updated 4 years ago
- ☆37Updated 4 months ago
- ☆20Updated 3 months ago
- ☆74Updated last year
- Collection of papers related to BCR repertoire analyses☆18Updated 3 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆53Updated last year
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆24Updated last year
- Draw RNA secondary structures in python.☆48Updated 9 months ago
- Code for 5UTR project☆24Updated 2 years ago
- ☆44Updated 3 years ago
- Code to reproduce Angenent-Mari, N. et al 2020. Deep Learning for RNA Synthetic Biology☆15Updated 2 years ago