This repo is for the metadata schemas associated with the HCA
☆70Apr 10, 2026Updated last month
Alternatives and similar repositories for metadata-schema
Users that are interested in metadata-schema are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The source code for the new version of the EMBL-EBI BioSamples database☆16Apr 16, 2026Updated last month
- Webin XML and JSON API.☆14May 1, 2026Updated 2 weeks ago
- Ontology for consent codes and data use requirements☆68Sep 21, 2022Updated 3 years ago
- DATS JSON schemas☆13Dec 21, 2022Updated 3 years ago
- Common data model proposal for biomedical research intended to facilitate and encourage data sharing and reuse☆20Oct 18, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- General, open-standard schema for cell annotations☆16Jun 16, 2025Updated 11 months ago
- JSON validator derived from AJV supporting ontology and taxonomy validation.☆21May 22, 2025Updated 11 months ago
- Documentations and Tutorials of Gosling.js☆12Sep 13, 2021Updated 4 years ago
- GitHub Action to launch a workflow using Nextflow Tower.☆12Mar 28, 2023Updated 3 years ago
- Web tool to assess FAIR principles and promote their implementation☆27May 14, 2026Updated last week
- DEPRECATED. See askomics/flaskomics☆21Jan 16, 2020Updated 6 years ago
- Utilities for large scale distributed single cell data processing☆24Jan 20, 2026Updated 4 months ago
- Owlery is a set of REST web services which allow querying of an OWL reasoner containing a configured set of ontologies.☆17Aug 13, 2024Updated last year
- Communitiy-based Cell Line Ontology☆18Feb 21, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A GA4GH Draft Beacon implementation☆11Oct 23, 2015Updated 10 years ago
- Collection of useful methods for single cell analysis☆15Aug 22, 2024Updated last year
- Soon to be deprecated in favor of broadinstitute/warp github repo. Previously: Secondary analysis pipelines☆47Mar 13, 2025Updated last year
- Simple walk-throughs of interacting with the DCP as a downstream data consumer.☆17Feb 11, 2026Updated 3 months ago
- A set of files to do genomics analysis on python☆18Jun 5, 2025Updated 11 months ago
- Python API and Jupyter widget for Vitessce☆66Apr 17, 2026Updated last month
- Computational Framework to reconstructing tumor clone structures☆15Mar 31, 2021Updated 5 years ago
- Open Targets Library ETL Pipeline | Apache Beam☆16May 5, 2021Updated 5 years ago
- ☆13Mar 25, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Material for a training on AI tools☆18Feb 3, 2026Updated 3 months ago
- Minimum Information About a Plant Phenotyping Experiment☆39Jan 7, 2026Updated 4 months ago
- The starting point for raising issues for Libero Publisher☆16Mar 25, 2020Updated 6 years ago
- Feature Annotation Location Description Ontology☆34Jan 21, 2020Updated 6 years ago
- The SnoVault general purpose hybrid object-relational database☆16Mar 7, 2024Updated 2 years ago
- This repository contains code to generate standardized cell type nomenclature from an R "dendrogram".☆13Apr 25, 2022Updated 4 years ago
- A crate for working with the Task Execution Service (TES) specification.☆13Jan 8, 2026Updated 4 months ago
- A GenePattern module for running the ssGSEA method☆16Mar 3, 2025Updated last year
- starfish: unified pipelines for image-based transcriptomics☆248May 11, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Sonification middleware☆12Oct 7, 2020Updated 5 years ago
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆18Jan 7, 2022Updated 4 years ago
- STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data☆182Dec 18, 2021Updated 4 years ago
- Repository for signature genes from Immune Cell Atlas☆20Sep 25, 2019Updated 6 years ago
- Makes distinct TSS of each gene from a Gencode annotation☆10Oct 19, 2016Updated 9 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆49Jul 20, 2022Updated 3 years ago
- Python pipeline and Javascript scatter plot library for single-cell datasets, http://cellbrowser.rtfd.org☆14Updated this week