This repo is for the metadata schemas associated with the HCA
☆71Jun 25, 2026Updated 3 weeks ago
Alternatives and similar repositories for metadata-schema
Users that are interested in metadata-schema are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Webin XML and JSON API.☆14Jul 13, 2026Updated last week
- The source code for the new version of the EMBL-EBI BioSamples database☆16Apr 16, 2026Updated 3 months ago
- Ontology for consent codes and data use requirements☆70Sep 21, 2022Updated 3 years ago
- DATS JSON schemas☆13Dec 21, 2022Updated 3 years ago
- Common data model proposal for biomedical research intended to facilitate and encourage data sharing and reuse☆20Oct 18, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- JSON validator derived from AJV supporting ontology and taxonomy validation.☆23May 22, 2025Updated last year
- General, open-standard schema for cell annotations☆16Jun 16, 2025Updated last year
- GitHub Action to launch a workflow using Nextflow Tower.☆12Mar 28, 2023Updated 3 years ago
- Documentations and Tutorials of Gosling.js☆12Sep 13, 2021Updated 4 years ago
- DEPRECATED. See askomics/flaskomics☆21Jan 16, 2020Updated 6 years ago
- Web tool to assess FAIR principles and promote their implementation☆29Jun 8, 2026Updated last month
- Utilities for large scale distributed single cell data processing☆24Jan 20, 2026Updated 6 months ago
- Communitiy-based Cell Line Ontology☆18Jun 20, 2026Updated last month
- Single cell RNA Seq data analysis with quantitative phenotypes☆13Nov 17, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Collection of useful methods for single cell analysis☆15Aug 22, 2024Updated last year
- Simple walk-throughs of interacting with the DCP as a downstream data consumer.☆17Feb 11, 2026Updated 5 months ago
- A GA4GH Draft Beacon implementation☆11Oct 23, 2015Updated 10 years ago
- Soon to be deprecated in favor of broadinstitute/warp github repo. Previously: Secondary analysis pipelines☆47Mar 13, 2025Updated last year
- Python API and Jupyter widget for Vitessce☆67Jun 10, 2026Updated last month
- The SnoVault general purpose hybrid object-relational database☆16Mar 7, 2024Updated 2 years ago
- Feature Annotation Location Description Ontology☆34Jan 21, 2020Updated 6 years ago
- Open Targets Library ETL Pipeline | Apache Beam☆16May 5, 2021Updated 5 years ago
- Computational Framework to reconstructing tumor clone structures☆15Mar 31, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆13Mar 25, 2026Updated 3 months ago
- The R programmatic interface to Synapse services☆27Oct 4, 2018Updated 7 years ago
- Minimum Information About a Plant Phenotyping Experiment☆41Jan 7, 2026Updated 6 months ago
- The starting point for raising issues for Libero Publisher☆16Mar 25, 2020Updated 6 years ago
- Materials and Jekyll website for the Wednesday software working group.☆10Feb 17, 2017Updated 9 years ago
- This repository contains code to generate standardized cell type nomenclature from an R "dendrogram".☆13Apr 25, 2022Updated 4 years ago
- A GenePattern module for running the ssGSEA method☆16Mar 3, 2025Updated last year
- starfish: unified pipelines for image-based transcriptomics☆249Updated this week
- C++ package for analysing CRISPR off targets☆21Apr 26, 2021Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- CRDC-H model in LinkML, developed by the Center for Cancer Data Harmonization (CCDH)☆18Jan 7, 2022Updated 4 years ago
- Sonification middleware☆12Oct 7, 2020Updated 5 years ago
- STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data☆184Dec 18, 2021Updated 4 years ago
- Relates to the article by Lioy, Cournac et al., Cell, 2018 (Functional partitioning of a bacterial chromosome through the interplay of nu…☆11Aug 19, 2020Updated 5 years ago
- HuBMAP Data Portal front end☆13Updated this week
- The Terra Data Repository built by the Jade team.☆13Updated this week
- A crate for working with the Task Execution Service (TES) specification.☆13Jan 8, 2026Updated 6 months ago