Alternatives and similar repositories for earlham-galaxytools

Users that are interested in earlham-galaxytools are comparing it to the libraries listed below

• nsoranzo / bioblend-tutorial
  ☆12Updated 3 years ago
• galaxyproject / admin-training
  Galaxy Admin Training
  ☆61Updated 8 months ago
• BioContainers / multi-package-containers
  Testing building mulled containers for multi-requirement tools.
  ☆76Updated this week
• galaxyproject / gxadmin
  Handy command line utility for Galaxy administrators
  ☆23Updated 4 months ago
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆79Updated 4 months ago
• usegalaxy-eu / usegalaxy-eu-tools
  List of tools included in https://usegalaxy.eu
  ☆34Updated this week
• bgruening / galaxy-rna-workbench
  Galaxy RNA workbench
  ☆40Updated 4 years ago
• galaxyproject / awesome-galaxy
  Awesome resources related to Galaxy project
  ☆12Updated 8 months ago
• frankMusacchia / Annocript
  Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …
  ☆55Updated 5 years ago
• SGBC / galaksio
  An easy-to-use way for running Galaxy workflows.
  ☆20Updated 5 years ago
• biowdl / tasks
  A collection of reusable WDL tasks. Category:Other
  ☆87Updated last week
• galaxyproject / dunovo
  Reference-free duplex sequencing pipeline.
  ☆18Updated 2 years ago
• MultiQC / MegaQC
  Web application to collect and visualise data across multiple MultiQC runs.
  ☆97Updated 7 months ago
• usegalaxy-eu / ena-upload-cli
  ENA upload cli - script your Open Data upload to the European Nucleotide Archive
  ☆29Updated last week
• bgruening / galaxy-tricks
  Useful tricks and tipps for Galaxy users
  ☆11Updated 2 years ago
• KHP-Informatics / ngseasy
  Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)
  ☆86Updated 8 years ago
• fhcrc / seqmagick
  An imagemagick-like frontend to Biopython SeqIO
  ☆115Updated last year
• Illumina / interop
  C++ Library to parse Illumina InterOp files
  ☆79Updated last month
• glennhickey / progressiveCactus
  Distribution package for the Prgressive Cactus multiple genome aligner. Dependencies are linked as submodules
  ☆85Updated 7 years ago
• chiulab / surpi
  SURPI
  ☆84Updated 9 years ago
• eclarke / swga
  Select primer sets for selective whole genome amplification (SWGA)
  ☆32Updated 6 years ago
• lh3 / fermikit
  De novo assembly based variant calling pipeline for Illumina short reads
  ☆108Updated 4 years ago
• bioinform / varsim
  VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
  ☆86Updated 10 months ago
• dnanexus-archive / parliament2
  Runs a combination of tools to generate structural variant calls on whole-genome sequencing data
  ☆102Updated 4 years ago
• mw55309 / Kraken_db_install_scripts
  Updated Kraken DB install scripts to cope with new-ish NCBI structure
  ☆47Updated 8 years ago
• svviz / svviz
  Read visualizer for structural variants
  ☆84Updated 6 years ago
• brentp / duphold
  don't get DUP'ed or DEL'ed by your putative SVs.
  ☆106Updated 4 years ago
• biocore / redbiom
  Sample search by metadata and features
  ☆47Updated last year
• lh3 / bfc
  High-performance error correction for Illumina resequencing data
  ☆72Updated 9 years ago
• galaxyproject / cargo-port
  cache packages permanently
  ☆14Updated last year