galaxyproject / dunovoLinks
Reference-free duplex sequencing pipeline.
☆18Updated 3 years ago
Alternatives and similar repositories for dunovo
Users that are interested in dunovo are comparing it to the libraries listed below
Sorting:
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 3 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆90Updated last year
- Concordance and contamination estimator for tumor–normal pairs☆58Updated last year
- Very simple, pure python, BAM file reader☆79Updated 6 years ago
- ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama…☆21Updated 3 years ago
- ABRA2☆95Updated 2 years ago
- Read visualizer for structural variants☆84Updated 7 years ago
- Web application to collect and visualise data across multiple MultiQC runs.☆95Updated 11 months ago
- Mutation Identification Pipeline. Read the latest documentation:☆47Updated last week
- ☆96Updated 3 years ago
- A collection of reusable WDL tasks. Category:Other☆88Updated 3 months ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆84Updated 3 months ago
- A C library for handling bigWig files☆81Updated 10 months ago
- NEAT read simulation tools☆101Updated 3 years ago
- Documentation and description of AWS iGenomes S3 resource.☆117Updated 11 months ago
- ☆57Updated 5 years ago
- Reference genome resource manager☆74Updated last year
- ExomeDepth R package for the detection of copy number variants in exomes and gene panels using high throughput DNA sequencing data.☆74Updated 4 months ago
- Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)☆86Updated 8 years ago
- ☆83Updated 3 years ago
- This repository contains information about latest release from Genome in a Bottle project☆75Updated 6 years ago
- A read extraction and realignment tool for next generation sequencing data☆103Updated 3 years ago
- Galaxy RNA workbench☆40Updated 5 years ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆125Updated 6 months ago
- Microassembly based somatic variant caller for NGS data☆154Updated 3 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆103Updated 5 years ago
- ☆69Updated 3 years ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆107Updated 4 years ago
- Tools for early stage alignment file processing☆95Updated 6 years ago
- An awk-like VCF parser☆56Updated last year