galaxyproject / dunovoLinks
Reference-free duplex sequencing pipeline.
☆19Updated 3 years ago
Alternatives and similar repositories for dunovo
Users that are interested in dunovo are comparing it to the libraries listed below
Sorting:
- Read visualizer for structural variants☆84Updated 7 years ago
- Very simple, pure python, BAM file reader☆79Updated 6 years ago
- NEAT read simulation tools☆101Updated 3 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆90Updated last year
- Web application to collect and visualise data across multiple MultiQC runs.☆95Updated last year
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆103Updated 5 years ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆126Updated 8 months ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆85Updated 2 weeks ago
- ☆83Updated 3 years ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆99Updated 3 years ago
- An awk-like VCF parser☆56Updated 2 years ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆107Updated 5 years ago
- Galaxy RNA workbench☆41Updated 5 years ago
- This repository contains information about latest release from Genome in a Bottle project☆75Updated 6 years ago
- ☆91Updated 4 years ago
- Python library to parse file formats related to Illumina bead arrays☆48Updated 11 months ago
- Reference genome resource manager☆74Updated last month
- Visualization and annotation of CNVs from population-scale whole-genome sequencing data☆72Updated 8 years ago
- A tool to benchmark mappers and different parameters within minutes☆44Updated 6 years ago
- igv.js standalone page generator and automatic configuration to view bam/cram/vcf/bed. "working in under 1 minute"☆131Updated 3 months ago
- De novo assembly based variant calling pipeline for Illumina short reads☆110Updated 5 years ago
- A read extraction and realignment tool for next generation sequencing data☆104Updated 3 years ago
- High-performance error correction for Illumina resequencing data☆74Updated 9 years ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆143Updated 4 months ago
- Thousand Variant Callers Project Repository☆74Updated 6 years ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆75Updated last year
- Testing building mulled containers for multi-requirement tools.☆83Updated this week
- Mutation Identification Pipeline. Read the latest documentation:☆47Updated 2 months ago
- LoFreq Star: Sensitive variant calling from sequencing data☆110Updated 3 months ago
- The Platinum Genomes Truthset☆89Updated 8 years ago