galaxyproject / dunovoLinks
Reference-free duplex sequencing pipeline.
☆18Updated 2 years ago
Alternatives and similar repositories for dunovo
Users that are interested in dunovo are comparing it to the libraries listed below
Sorting:
- Read visualizer for structural variants☆84Updated 7 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆87Updated 11 months ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 3 years ago
- NEAT read simulation tools☆98Updated 3 years ago
- This repository contains information about latest release from Genome in a Bottle project☆74Updated 6 years ago
- A collection of reusable WDL tasks. Category:Other☆88Updated 3 weeks ago
- Visualization and annotation of CNVs from population-scale whole-genome sequencing data☆72Updated 7 years ago
- An awk-like VCF parser☆56Updated last year
- ABRA2☆92Updated 2 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆103Updated 4 years ago
- Web application to collect and visualise data across multiple MultiQC runs.☆96Updated 8 months ago
- Concordance and contamination estimator for tumor–normal pairs☆58Updated 10 months ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆82Updated 3 weeks ago
- Very simple, pure python, BAM file reader☆79Updated 6 years ago
- Assembly Based ReAligner☆74Updated 7 years ago
- ☆82Updated 6 years ago
- ExomeDepth R package for the detection of copy number variants in exomes and gene panels using high throughput DNA sequencing data.☆73Updated 2 months ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆122Updated 4 months ago
- Scalable gVCF merging and joint variant calling for population sequencing projects☆166Updated last year
- Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)☆86Updated 8 years ago
- ☆91Updated 3 years ago
- ☆57Updated 5 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆79Updated last year
- ☆21Updated 4 years ago
- ☆95Updated 2 years ago
- De novo assembly based variant calling pipeline for Illumina short reads☆108Updated 4 years ago
- Microassembly based somatic variant caller for NGS data☆154Updated 3 years ago
- The Platinum Genomes Truthset☆88Updated 7 years ago
- Tools for early stage alignment file processing☆95Updated 6 years ago
- Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data☆88Updated 2 months ago