biomed-AI / Hist2STLinks
☆45Updated 3 years ago
Alternatives and similar repositories for Hist2ST
Users that are interested in Hist2ST are comparing it to the libraries listed below
Sorting:
- PyTorch implementation of HisToGene☆42Updated 3 years ago
- Deep learning on histopathology images.☆125Updated 3 years ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆79Updated 9 months ago
- Her2 Breast Cancer Project☆83Updated 2 years ago
- ☆84Updated 2 months ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆57Updated last year
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Updated 4 years ago
- ☆71Updated 2 months ago
- Code for ST_IGI package☆30Updated 3 weeks ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆42Updated 7 months ago
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆42Updated 2 months ago
- Exemplar Guided Deep Neural Network for Spatial Transcriptomics Analysis of Gene Expression Prediction☆17Updated last year
- ☆137Updated 7 months ago
- ☆29Updated 2 years ago
- Code for the THItoGene☆24Updated 3 months ago
- ☆39Updated 4 months ago
- Foundation Model for Multiplex Spatial Proteomic Images☆69Updated last month
- Train a model to predict gene expression from histology slides.☆105Updated 3 years ago
- Data and code to accompany our Nature publication☆46Updated 3 years ago
- ☆14Updated 3 weeks ago
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆21Updated 4 months ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆68Updated 6 months ago
- ☆12Updated 2 months ago
- GrandQC tool for tissue detection and quality control in pathology☆57Updated 4 months ago
- A pan-cancer platform for mutation prediction from routine histology☆68Updated 4 years ago
- ☆42Updated 7 months ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆30Updated 3 months ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆37Updated 2 months ago
- Code from Foersch et al. (Under Construction / Development)☆37Updated 2 years ago
- CEll spatial Organization-based graph convolutional network☆26Updated last year