maxpmx / HisToGeneLinks
PyTorch implementation of HisToGene
☆42Updated 3 years ago
Alternatives and similar repositories for HisToGene
Users that are interested in HisToGene are comparing it to the libraries listed below
Sorting:
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆81Updated 10 months ago
- ☆42Updated 5 months ago
- ☆46Updated 3 years ago
- Deep learning on histopathology images.☆130Updated 4 years ago
- Her2 Breast Cancer Project☆87Updated 2 years ago
- ☆73Updated 4 months ago
- ☆99Updated 3 months ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆40Updated 4 months ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆42Updated 9 months ago
- Code for the THItoGene☆24Updated 5 months ago
- ☆11Updated 6 months ago
- Leveraging Digital Pathology Foundation Models to characterize the tumor microenvironment (TME)☆16Updated 2 months ago
- Exemplar Guided Deep Neural Network for Spatial Transcriptomics Analysis of Gene Expression Prediction☆17Updated last year
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆39Updated 8 months ago
- CEll spatial Organization-based graph convolutional network☆26Updated last year
- ☆34Updated 6 months ago
- ☆55Updated 2 years ago
- Code for ST_IGI package☆30Updated 2 months ago
- [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…☆24Updated last year
- First commit☆63Updated 3 years ago
- A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular state revelation of gliom…☆36Updated 9 months ago
- A generative toolkit to translate H&E images to multiplexed IHC☆52Updated 9 months ago
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆49Updated last year
- GrandQC tool for tissue detection and quality control in pathology☆63Updated 6 months ago
- ☆141Updated 8 months ago
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆44Updated 4 years ago
- Train a model to predict gene expression from histology slides.☆107Updated 3 years ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆20Updated 3 years ago
- ☆20Updated 2 years ago
- ☆33Updated 2 years ago