CharlieCheckpt / pacpaint
☆11Updated last year
Related projects ⓘ
Alternatives and complementary repositories for pacpaint
- Code for ST_IGI package☆16Updated last week
- ☆32Updated 2 years ago
- ☆95Updated last month
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆48Updated 8 months ago
- ☆10Updated 2 months ago
- PyTorch implementation of HisToGene☆29Updated 2 years ago
- ☆25Updated last year
- Deep learning on histopathology images.☆98Updated 3 years ago
- ☆24Updated 6 months ago
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆12Updated 7 months ago
- Sub-cellular spatial transcriptomics Cell Segmentation☆56Updated last year
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆46Updated 8 months ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆27Updated this week
- MUSE is a deep learning approach characterizing tissue composition through combined analysis of morphologies and transcriptional states f…☆32Updated 2 years ago
- Super-resolved spatial transcriptomics by deep data fusion☆67Updated last year
- ☆11Updated 4 years ago
- Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data☆35Updated 4 months ago
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆65Updated last month
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆21Updated 2 months ago
- Visual foundation model enabling rapid, accurate detection of brain tumor infiltration during surgery☆12Updated last week
- ☆33Updated 7 months ago
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆105Updated 3 months ago
- ☆49Updated last year
- ☆21Updated 2 years ago
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆18Updated 2 months ago
- Multimodal deep learning to predict distant recurrence-free probability from digitized H&E tumour slide and tumour stage.☆33Updated 5 months ago
- domain adaptation of spatial and single-cell transcriptome☆24Updated 2 months ago
- A vision language model for gigapixel whole slide images in histopathology☆27Updated 2 months ago
- Scripts capable of re-creating figures from Van Valen Lab publications☆18Updated 2 years ago
- Her2 Breast Cancer Project☆57Updated last year