CharlieCheckpt / pacpaint
☆11Updated 2 years ago
Alternatives and similar repositories for pacpaint
Users that are interested in pacpaint are comparing it to the libraries listed below
Sorting:
- ☆40Updated 3 years ago
- PyTorch implementation of HisToGene☆39Updated 3 years ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆29Updated last month
- DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images☆33Updated last week
- Code for ST_IGI package☆25Updated 6 months ago
- ☆27Updated 2 years ago
- ☆10Updated this week
- The Single-Cell Pathology Landscape of Breast Cancer☆26Updated 5 years ago
- Her2 Breast Cancer Project☆72Updated 2 years ago
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆25Updated last month
- ☆129Updated 4 months ago
- ☆32Updated last month
- ☆12Updated 8 months ago
- Sub-cellular spatial transcriptomics Cell Segmentation☆64Updated last year
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆54Updated last year
- domain adaptation of spatial and single-cell transcriptome☆27Updated 7 months ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆54Updated last year
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆41Updated last month
- A public MuSpAn page for community discussions and issue reporting.☆11Updated last week
- ☆33Updated 4 months ago
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆15Updated last month
- ☆54Updated 2 years ago
- ☆34Updated 3 years ago
- ☆64Updated 3 months ago
- machine-readable information for the TCGA dataset, mirrored from other sources☆20Updated 2 years ago
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆116Updated 8 months ago
- sc-MTOP is an analysis framework based on deep learning and computational pathology. This framework aims to characterize the tumor ecosys…☆33Updated this week
- ☆33Updated 3 weeks ago
- Deep learning on histopathology images.☆120Updated 3 years ago
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆18Updated last month