☆57Mar 28, 2025Updated last year
Alternatives and similar repositories for HistoCell
Users that are interested in HistoCell are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆33Apr 29, 2026Updated 4 months ago
- ☆14May 28, 2025Updated last year
- PyTorch implementation of HisToGene☆58Nov 30, 2021Updated 4 years ago
- ☆73Sep 16, 2025Updated last year
- STPath: A Generative Foundation Model for Integrating Spatial Transcriptomics and Whole Slide Images☆53Jul 27, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆62Apr 26, 2022Updated 4 years ago
- Integrating histology and spatial transcriptomics - NeurIPS 2024☆438Apr 16, 2026Updated 5 months ago
- Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms☆50Oct 22, 2025Updated 11 months ago
- A large scale benchmark for cross-modal learning of histology and spatial expressions☆24Oct 28, 2025Updated 10 months ago
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆54Mar 24, 2026Updated 6 months ago
- The source code for "High-Parameter Spatial Multi-Omics through Histology-Anchored Integration"☆39May 15, 2026Updated 4 months ago
- ☆91Jun 2, 2026Updated 3 months ago
- DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and sin…☆99Sep 2, 2026Updated 3 weeks ago
- ☆52May 19, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A visual–omics foundation model to bridge histopathology with spatial transcriptomics☆149Jun 3, 2025Updated last year
- Segment Anything for Histopathology☆74Jun 6, 2026Updated 3 months ago
- ☆76Sep 3, 2026Updated 3 weeks ago
- Code for the THItoGene☆31Apr 9, 2025Updated last year
- A toolkit for computational pathology analysis including cancer subtyping, survial analysis, report generation, and biomark prediction.☆21Jan 19, 2025Updated last year
- ☆22Oct 30, 2022Updated 3 years ago
- A generative toolkit to translate H&E images to multiplexed IHC☆69Dec 11, 2024Updated last year
- ☆25Apr 3, 2025Updated last year
- [PR 2025] Code for UMPIRE☆14Mar 10, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Leveraging Digital Pathology Foundation Models to characterize the tumor microenvironment (TME)☆38Nov 24, 2025Updated 9 months ago
- ☆37Jul 18, 2025Updated last year
- mclSTExp: Multimodal Contrastive Learning for Spatial Gene Expression Prediction Using Histology Images☆42Jan 10, 2025Updated last year
- ☆14Jun 10, 2025Updated last year
- Repository in Support of EAGLE Submission☆28Oct 11, 2025Updated 11 months ago
- Dataloader for common proteomics search engine outputs into AnnData format☆14Mar 25, 2026Updated 5 months ago
- ViDRiP-LLaVA: A Dataset and Benchmark for Diagnostic Reasoning from Pathology Videos☆25May 21, 2025Updated last year
- ☆19Mar 30, 2025Updated last year
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆116Oct 15, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- [MICCAI 2024] Official Repo of "HistGen: Histopathology Report Generation via Local-Global Feature Encoding and Cross-modal Context Inter…☆85Dec 23, 2024Updated last year
- Scalable Generation of Spatial Transcriptomics from Histology Images via Whole-Slide Flow Matching, ICML2025 (Spotlight)☆38Aug 11, 2025Updated last year
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆26Mar 16, 2025Updated last year
- ☆174Dec 20, 2024Updated last year
- Her2 Breast Cancer Project☆110Nov 27, 2022Updated 3 years ago
- This repository includes codes and data example used in the "Integrative Spatial Analysis Reveals Tumor Heterogeneity and Immune Colon…☆19May 26, 2025Updated last year
- Deep learning on histopathology images.☆149Sep 8, 2021Updated 5 years ago