StephanHolgerD / DrukBamLinks
☆20Updated last year
Alternatives and similar repositories for DrukBam
Users that are interested in DrukBam are comparing it to the libraries listed below
Sorting:
- A Nextflow workflow to generate lift over files for any pair of genomes☆67Updated last week
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- new repo☆28Updated 4 years ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆49Updated 3 months ago
- MarginPolish: Graph based assembly polishing☆46Updated 4 years ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆43Updated 2 weeks ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Population-wide Deletion Calling☆35Updated 2 months ago
- Structural variant caller☆54Updated 3 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- python plotly Circos from VCF☆38Updated last year
- Joint structural variant and copy number variant caller for HiFi sequencing data☆54Updated last week
- Filter SAM file for soft and hard clipped alignments☆49Updated last year
- Tumour-only somatic mutation calling using long reads☆27Updated 7 months ago
- perSVade: personalized Structural Variation detection☆39Updated 4 months ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆56Updated last year
- Error correction of ONT transcript reads☆58Updated last year
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆57Updated 3 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 5 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- ☆28Updated 2 years ago
- Miscellaneous scripts for applications of PacBio systems☆27Updated 3 years ago
- Various scripts and recipes for working with nanopore data☆34Updated 9 years ago
- UCSC Nanopore☆43Updated 5 years ago
- WDL workflows for variant calling and assembly using ONT☆35Updated 3 weeks ago
- Compute N50/NG50 and auN/auNG☆32Updated last year
- ☆27Updated last year
- ☆26Updated 4 months ago
- ☆48Updated last year
- ☆28Updated last month