baselmans / multivariate_GWAMALinks
Code for multivariate genome wide association meta analysis
☆20Updated 5 years ago
Alternatives and similar repositories for multivariate_GWAMA
Users that are interested in multivariate_GWAMA are comparing it to the libraries listed below
Sorting:
- Network representation of LDSC results☆29Updated 3 years ago
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆26Updated last year
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆20Updated 4 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 3 months ago
- Regional association plots☆26Updated last year
- Data and code for the Effector index☆13Updated 4 years ago
- Primo☆16Updated 3 years ago
- A collection of various utilities for GWAS summary statistics☆27Updated last year
- LDlinkR☆59Updated last year
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- Older repo for MRLocus. See new website for software usage guide:☆15Updated last year
- ☆19Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 2 years ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆32Updated last year
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆27Updated 2 years ago
- Fine-mapping pipeline for Open Targets Genetics☆26Updated 2 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Updated 4 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆53Updated 4 years ago
- PRS pipeline using PRS_CS☆14Updated 3 weeks ago
- Software for estimating correlation of trait effect sizes across populations☆46Updated 3 weeks ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- ☆10Updated 4 years ago
- Sample code for ldsc analyses in UKBB☆30Updated 2 years ago
- GENI plots to visualise results from genome-wide association studies☆28Updated 8 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- ☆18Updated last year
- An R package for generating comparative regional association plots☆18Updated 6 months ago
- Scripts used for generating Neale Lab UKB results☆20Updated 2 years ago