Sentieon DNAseq
☆23Dec 30, 2020Updated 5 years ago
Alternatives and similar repositories for sentieon-dnaseq
Users that are interested in sentieon-dnaseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Model files for Sentieon variant callers☆16Mar 10, 2026Updated 2 weeks ago
- Somatic point mutation caller☆17Jul 8, 2016Updated 9 years ago
- ☆16Feb 26, 2026Updated last month
- PharmGKB NGS Pipeline☆19Oct 2, 2018Updated 7 years ago
- Fork of https://bitbucket.org/mcgranahanlab/lohhla☆18Feb 19, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets☆38Jul 30, 2020Updated 5 years ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆99Jun 22, 2022Updated 3 years ago
- A copy number caller for SMN1 and SMN2 to enable SMA diagnosis and carrier screening with WGS☆51Oct 14, 2023Updated 2 years ago
- LDkit: a parallel computing toolkit for linkage disequilibrium analysis☆19Sep 4, 2020Updated 5 years ago
- Helper scripts for biological data processing from Sentieon☆65Jan 27, 2026Updated 2 months ago
- A set of command line tools based on R and JavaScript.☆18Apr 21, 2020Updated 5 years ago
- VCF Observer is a VCF file analysis, comparison, and visualization tool.☆18Jan 3, 2025Updated last year
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society …☆18Dec 26, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Pipeline to generate variant catalogues, a list of variants and their frequencies in a population, from whole genome sequences.☆13Jun 3, 2025Updated 9 months ago
- Workshop for CNV analysis with Bioconductor☆17Jan 6, 2025Updated last year
- Annotation of VCF variants with functional impact and from databases (executable+library)☆65Updated this week
- Working space for the GIAB TR benchmarking project☆24Oct 24, 2024Updated last year
- Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework☆50Nov 13, 2023Updated 2 years ago
- ☆22Oct 6, 2023Updated 2 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆20Sep 8, 2023Updated 2 years ago
- Please switch to https://github.com/OpenGene/defastq☆29Jul 28, 2018Updated 7 years ago
- This repository contains data indexes from NIST's Genome in a Bottle project.☆264Nov 30, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Pipeline for structural variant image curation and analysis.☆49Dec 5, 2021Updated 4 years ago
- 肿瘤突变负荷学习笔记(tumor mutation burden)☆16Dec 10, 2019Updated 6 years ago
- Clone identification from single-cell data☆63Nov 10, 2022Updated 3 years ago
- Hardware Acceleration of Long Read Pairwise Overlapping in Genome Sequencing: Open Source Repository☆34Nov 8, 2024Updated last year
- a tool for predicting mitochondrial DNA deletions using soft-clipping☆23Feb 3, 2022Updated 4 years ago
- ☆20Feb 18, 2025Updated last year
- The Platinum Genomes Truthset☆90Nov 8, 2017Updated 8 years ago
- Human mitochondrial variants annotation using HmtVar.☆18Oct 16, 2023Updated 2 years ago
- TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain☆34Mar 4, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆108Jun 6, 2021Updated 4 years ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- Scripts for next generation sequencing☆49Nov 13, 2019Updated 6 years ago
- Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV…☆21Jun 30, 2020Updated 5 years ago
- Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data☆115Oct 25, 2021Updated 4 years ago
- ☆81Nov 30, 2018Updated 7 years ago
- ☆35Mar 2, 2021Updated 5 years ago