Sentieon DNAseq
☆23Dec 30, 2020Updated 5 years ago
Alternatives and similar repositories for sentieon-dnaseq
Users that are interested in sentieon-dnaseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Model files for Sentieon variant callers☆17Updated this week
- Somatic point mutation caller☆17Jul 8, 2016Updated 10 years ago
- ☆16Jul 9, 2026Updated 2 weeks ago
- PharmGKB NGS Pipeline☆19Oct 2, 2018Updated 7 years ago
- Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets☆38Jul 30, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆99Apr 20, 2026Updated 3 months ago
- LDkit: a parallel computing toolkit for linkage disequilibrium analysis☆19Sep 4, 2020Updated 5 years ago
- A copy number caller for SMN1 and SMN2 to enable SMA diagnosis and carrier screening with WGS☆51Oct 14, 2023Updated 2 years ago
- A set of command line tools based on R and JavaScript.☆17Apr 21, 2020Updated 6 years ago
- Helper scripts for biological data processing from Sentieon☆65Apr 3, 2026Updated 3 months ago
- hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society …☆18Dec 26, 2022Updated 3 years ago
- Pipeline to generate variant catalogues, a list of variants and their frequencies in a population, from whole genome sequences.☆13Jun 3, 2025Updated last year
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- Working space for the GIAB TR benchmarking project☆24Oct 24, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- Annotation of VCF variants with functional impact and from databases (executable+library)☆66Jul 13, 2026Updated 2 weeks ago
- Workshop for CNV analysis with Bioconductor☆17Jan 6, 2025Updated last year
- Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework☆51Nov 13, 2023Updated 2 years ago
- This repository contains the latest version of the HomeRange data and R package.☆12Apr 17, 2025Updated last year
- ☆22Oct 6, 2023Updated 2 years ago
- Please switch to https://github.com/OpenGene/defastq☆29Jul 28, 2018Updated 8 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Sep 8, 2023Updated 2 years ago
- This repository contains data indexes from NIST's Genome in a Bottle project.☆270Nov 30, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Pipeline for structural variant image curation and analysis.☆49Dec 5, 2021Updated 4 years ago
- 肿瘤突变负荷学习笔记(tumor mutation burden)☆16Dec 10, 2019Updated 6 years ago
- Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV…☆21Jun 30, 2020Updated 6 years ago
- Hardware Acceleration of Long Read Pairwise Overlapping in Genome Sequencing: Open Source Repository☆34Nov 8, 2024Updated last year
- Clone identification from single-cell data☆65Nov 10, 2022Updated 3 years ago
- Human mitochondrial variants annotation using HmtVar.☆18Oct 16, 2023Updated 2 years ago
- ☆20Feb 18, 2025Updated last year
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆115Jun 6, 2021Updated 5 years ago
- TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain☆35Mar 4, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- The Platinum Genomes Truthset☆90Nov 8, 2017Updated 8 years ago
- ☆36Mar 2, 2021Updated 5 years ago
- This repo is designed as a step-by-step tutorial to teach RNA-seq analysis☆16Dec 21, 2025Updated 7 months ago
- Command line tools for CMDB varaints browser☆23May 14, 2024Updated 2 years ago
- Scripts for next generation sequencing☆49Nov 13, 2019Updated 6 years ago
- a tool for predicting mitochondrial DNA deletions using soft-clipping☆23Feb 3, 2022Updated 4 years ago
- PSMC-based Migration and Split Time Inference (MiSTI) from two genomes☆12Mar 20, 2026Updated 4 months ago