Illumina / PlatinumGenomesLinks
The Platinum Genomes Truthset
☆89Updated 7 years ago
Alternatives and similar repositories for PlatinumGenomes
Users that are interested in PlatinumGenomes are comparing it to the libraries listed below
Sorting:
- This repository contains information about latest release from Genome in a Bottle project☆75Updated 6 years ago
- NEAT read simulation tools☆101Updated 3 years ago
- A suite of tools for detecting expansions of short tandem repeats☆83Updated 2 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆103Updated 4 years ago
- A tool for profiling long STRs from short reads☆99Updated 4 years ago
- ☆82Updated 6 years ago
- ABRA2☆93Updated 2 years ago
- Whole Genome Simulator for Next-Generation Sequencing☆101Updated 10 months ago
- phasing and Allele Specific Expression from RNA-seq☆116Updated last year
- ExomeDepth R package for the detection of copy number variants in exomes and gene panels using high throughput DNA sequencing data.☆74Updated 3 months ago
- Read visualizer for structural variants☆84Updated 7 years ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 3 years ago
- Microassembly based somatic variant caller for NGS data☆154Updated 3 years ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆72Updated last year
- Script to automatically create and run IGV snapshot batchscripts☆143Updated 2 years ago
- Relevant papers for CNV and SV approaches☆94Updated 11 months ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆106Updated 4 years ago
- Software program for checking sample matching for NGS data☆137Updated last year
- Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data☆91Updated 3 weeks ago
- C++ htslib/bwa-mem/fermi interface for interrogating sequence data☆137Updated 3 weeks ago
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆99Updated last year
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 6 years ago
- Documenting usage and experience with bioinformatic tools☆40Updated 10 years ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆142Updated last month
- ☆123Updated 2 months ago
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆82Updated 2 years ago
- Visualization and annotation of CNVs from population-scale whole-genome sequencing data☆72Updated 7 years ago
- Tools for early stage alignment file processing☆95Updated 6 years ago
- BAM Statistics, Feature Counting and Annotation☆150Updated last week
- Filtering and profiling of next-generational sequencing data using region-specific rules☆79Updated last year