Bioconductor / bioc_docker
[DEPRECATED] Docker containers for Bioconductor
☆49Updated last year
Related projects: ⓘ
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆40Updated 3 months ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 2 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆43Updated 4 months ago
- Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment☆30Updated 3 weeks ago
- Course material for introductory R / Bioconductor courses☆44Updated last year
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 7 years ago
- Glimma R package☆50Updated 2 weeks ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆42Updated 4 months ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆25Updated last year
- Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R☆35Updated 2 years ago
- Reactome Pathway Analysis☆37Updated 3 weeks ago
- Visualize Cytometry data with ggplot2☆55Updated 6 months ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 5 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- The START App: R Shiny Transcriptome Analysis Resource Tool☆89Updated 3 years ago
- DESeq2 or edgeR☆22Updated 7 years ago
- [DEPRECATED] An R package for Google Genomics API queries.☆44Updated last year
- Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.☆31Updated 6 years ago
- Bioconductor facilities for parallel evaluation☆65Updated 4 months ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 7 months ago
- Transcript quantification import with automatic metadata detection☆66Updated 3 months ago
- Quick access to gene synonyms☆24Updated 2 weeks ago
- Modular & interactive analysis components for bioinformatics☆16Updated last week
- An R Interface to the ImmuneSpace database portal☆24Updated 9 months ago
- Independent Hypothesis Weighting☆15Updated 11 months ago
- flowWorkspace☆44Updated 6 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆15Updated 5 years ago
- Devel repository for minfi☆58Updated 4 months ago
- R interface to morpheus.js heatmap widget☆37Updated 3 years ago
- This python package is for transitioning bioconductor from SVN to git☆14Updated last year