Alternatives and similar repositories for bioc_docker

Users that are interested in bioc_docker are comparing it to the libraries listed below

• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆41Updated 5 months ago
• seandavi / wdlRunR
  Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
  ☆34Updated 3 years ago
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆72Updated last month
• Bioconductor / BiocIntro
  Course material for introductory R / Bioconductor courses
  ☆44Updated 2 years ago
• seandavi / Bioc2017BigDataWorkshopSession
  Tutorial for working with cloud infrastructure and AWS from R
  ☆20Updated 7 years ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆44Updated last month
• jminnier / STARTapp
  The START App: R Shiny Transcriptome Analysis Resource Tool
  ☆90Updated 4 years ago
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated last month
• Shians / Glimma
  Glimma R package
  ☆50Updated 9 months ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated 2 years ago
• RGLab / ImmuneSpaceR
  An R Interface to the ImmuneSpace database portal
  ☆24Updated last year
• lcolladotor / derfinder
  Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches
  ☆43Updated 5 months ago
• friend1ws / pmsignature
  R package for extracting mutation signatures from a list of somatic mutations
  ☆37Updated 5 years ago
• RGLab / ggcyto
  Visualize Cytometry data with ggplot2
  ☆59Updated last year
• Bioconductor / GoogleGenomics
  [DEPRECATED] An R package for Google Genomics API queries.
  ☆45Updated 2 years ago
• gladkia / igvR
  An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser
  ☆45Updated 6 months ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• nickjer / singularity-rstudio
  RStudio Server in a Singularity container
  ☆55Updated 10 months ago
• cmap / morpheus.R
  R interface to morpheus.js heatmap widget
  ☆38Updated 4 years ago
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆33Updated 3 weeks ago
• isb-cgc / examples-R
  Analysis examples based on the ISB-CGC hosted TCGA data, using R and R Markdown.
  ☆31Updated 7 years ago
• Bioconductor / bioc_git_transition
  This python package is for transitioning bioconductor from SVN to git
  ☆14Updated 2 years ago
• Bioconductor / BiocParallel
  Bioconductor facilities for parallel evaluation
  ☆67Updated last week
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆20Updated 10 months ago
• oganm / geneSynonym
  Quick access to gene synonyms
  ☆28Updated this week
• YuLab-SMU / ReactomePA
  Reactome Pathway Analysis
  ☆42Updated last month
• gboris / blkbox
  Data exploration with multiple machine learning algorithms
  ☆14Updated 3 years ago
• mikelove / deseq2_or_edger
  DESeq2 or edgeR
  ☆22Updated 8 years ago
• Bioconductor / bioconductor_full
  [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages
  ☆25Updated 2 years ago
• jasdumas / shinyGEO
  Gene Expression Omnibus Analysis with Shiny
  ☆41Updated 3 years ago