PeptoneLtd / ADOPTLinks
ADOPT: intrinsic protein disorder prediction through deep bidirectional transformers
☆17Updated 10 months ago
Alternatives and similar repositories for ADOPT
Users that are interested in ADOPT are comparing it to the libraries listed below
Sorting:
- Deep learning for protein science☆37Updated last year
- Protein design and variant prediction using autoregressive generative models☆114Updated last year
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆134Updated last week
- Sandbox for Deep-Learning based Computational Protein Design☆117Updated 2 weeks ago
- ☆107Updated last year
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- Directed evolution of proteins in sequence space with gradients☆91Updated last week
- A Python package for extracting protein sequence features☆63Updated 3 years ago
- Reimplementation of the UniRep protein featurization model.☆108Updated last year
- Compressing protein structures effectively with torsion angles☆180Updated 3 months ago
- Predict the structure of immune receptor proteins☆57Updated 11 months ago
- Protein Structure Analysis☆63Updated last month
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆164Updated last year
- Analysis and figure code from Alley et al. 2019.☆59Updated 2 years ago
- Improved antibody structure-based design using inverse folding☆142Updated 2 months ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆129Updated 3 years ago
- Attempt at reproduction of AlphaFold2☆98Updated last year
- Evolutionary velocity with protein language models☆94Updated 2 years ago
- Predict the structure of immune receptor proteins☆163Updated 9 months ago
- Evolutionary couplings from protein and RNA sequence alignments☆286Updated last week
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆82Updated last year
- ☆35Updated last year
- trRosetta for protein design☆183Updated 4 years ago
- Efficient evolution from protein language models☆217Updated 2 years ago
- The DSSP building software☆47Updated 2 years ago
- Dataset and package for working with protein-protein interactions in 3D☆96Updated 6 months ago
- A generative latent variable model for biological sequence families.☆241Updated 3 years ago
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆150Updated last week
- AlphaLink: Integrating crosslinking MS data into OpenFold☆70Updated last year
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆165Updated 2 years ago