Alternatives and similar repositories for workshop-tidyverse

Users that are interested in workshop-tidyverse are comparing it to the libraries listed below

• jianhong / ChIPpeakAnno
  ☆13Updated 2 months ago
• openvax / gene-lists
  Gene lists related to cancer immunotherapy
  ☆14Updated last year
• namphuon / ViFi
  Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.
  ☆29Updated 4 years ago
• Clinical-Genomics / BALSAMIC
  Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer
  ☆51Updated last week
• datapplab / SBGNview
  ☆28Updated 2 years ago
• Young-gonKim / SnackVar
  ☆12Updated 4 years ago
• nasqar / ClusterProfShinyGSEA
  A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries
  ☆16Updated 5 years ago
• ISCB-Academy / Elements-of-Style-Reproducible-Workflow-Creation-Maintenance-Tutorial
  ☆19Updated 3 years ago
• mdozmorov / RNA-seq_notes
  A continually expanding collection of RNA-seq tools
  ☆52Updated 11 months ago
• datapplab / pathview
  pathway based data integration and visualization
  ☆41Updated 6 months ago
• kensung-lab / SurVirus
  ☆18Updated 4 years ago
• CshlSiepelLab / RPHAST
  RPHAST: Phylogenetic Analysis with Space/Time Models in R
  ☆11Updated 10 months ago
• nf-core / viralintegration
  Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.
  ☆17Updated 3 months ago
• lawremi / rtracklayer
  R interface to genome annotation files and the UCSC genome browser
  ☆35Updated last week
• sheynkman-lab / Long-Read-Proteogenomics
  A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.
  ☆48Updated 2 years ago
• genepi / nf-gwas
  A nextflow pipeline to perform state-of-the-art genome-wide association studies.
  ☆74Updated 6 months ago
• NBISweden / workshop-mlbiostatistics
  Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods
  ☆16Updated 3 months ago
• qiukunlong / seeksv
  A bioinformatics tool for SV detection and virus integration discovery
  ☆21Updated 8 years ago
• jianhong / trackViewer
  A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot
  ☆74Updated 3 months ago
• TheJacksonLaboratory / JAXBD2K-ShortCourse
  This repository contains course materials from JAX-BD2K workshop.
  ☆32Updated 6 years ago
• BIMSBbioinfo / genomation
  R package for genomic feature analysis and visualization
  ☆79Updated 5 months ago
• griffithlab / VAtools
  A set of tools to annotate VCF files with expression and readcount data
  ☆29Updated 6 months ago
• sigven / cpsr
  Cancer Predisposition Sequencing Reporter (CPSR)
  ☆61Updated last week
• UMCUGenetics / NextflowModules
  UMCU Genetics Nextflow modules
  ☆28Updated 11 months ago
• IARCbioinfo / IARC-nf
  List of IARC bioinformatics pipelines and resources
  ☆53Updated 2 months ago
• UW-GAC / analysis_pipeline
  TOPMed analysis pipeline
  ☆52Updated last year
• TRON-Bioinformatics / tronflow-hla-hd
  A Nextflow workflow for HLA typing using HLA-HD
  ☆11Updated last year
• brentp / tiwih
  simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.
  ☆44Updated 2 years ago
• mritchielab / GlimmaV2
  interactive plots for differential expression analysis
  ☆34Updated 3 months ago
• Oshlack / MINTIE
  Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
  ☆36Updated last year