mungpeter / RAMAplotLinks
Generate Ramachandran plots for single PDB structure and as heatmap for MD trajectory
☆9Updated 3 years ago
Alternatives and similar repositories for RAMAplot
Users that are interested in RAMAplot are comparing it to the libraries listed below
Sorting:
- ☆15Updated 2 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- ☆30Updated 3 weeks ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆26Updated 3 years ago
- For the purpose of post progressing of MD carried by gromacs☆22Updated 2 months ago
- Set of useful HADDOCK utility scripts☆52Updated 9 months ago
- An implementation of the 3SPN2 and 3SPN2.C coarse-grained DNA forcefields in OpenMM☆18Updated last month
- A unified and modular interface to homology modelling software☆11Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated last year
- ☆26Updated 3 weeks ago
- Python code to run Supervised Molecular Dynamics (SuMD) simulations☆15Updated last year
- Protein-protein binding affinity benchmark☆15Updated 3 months ago
- A collection of useful tutorials for Protein Science☆18Updated 9 years ago
- An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM☆36Updated last week
- PyMOL Plugin for displaying polar contacts☆17Updated 6 years ago
- Python Toolbox For Rosetta Silent Files Processing☆16Updated 6 years ago
- Open Source, Mostly just clicking mouse to finish a simulation with Ambertools and OpenMM. It was designed to use locally but another not…☆35Updated last month
- ☆22Updated last year
- PyDock Tutorial☆32Updated 6 years ago
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆19Updated 6 years ago
- Contact map analysis for biomolecules; based on MDTraj☆45Updated 5 months ago
- Tutorials and examples for nicer animations (movies) and images in PyMOL.☆21Updated 10 years ago
- Python implementation of the Ramachandran plot☆48Updated 5 years ago
- Educational Notes on Molecular Modeling