gqi / DAESC
☆10Updated 4 months ago
Related projects ⓘ
Alternatives and complementary repositories for DAESC
- ☆18Updated 4 months ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆42Updated last year
- Perform differential expression analysis on multi-sample single cell datasets using linear mixed models☆20Updated 2 weeks ago
- ☆27Updated 3 months ago
- Code to run the scHLApers pipeline for personalized single-cell HLA quantification☆17Updated 10 months ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆38Updated 2 years ago
- Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types☆24Updated 3 years ago
- ☆24Updated 4 months ago
- A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic …☆24Updated 2 weeks ago
- ☆29Updated last year
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆43Updated 3 years ago
- ☆16Updated 4 months ago
- An R package to analyze single-cell V(D)J data☆24Updated last year
- An r package that works as a wrapper to homologene☆42Updated last year
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆33Updated 3 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated last year
- Harvard FAS informatics scRNAseq workshop website☆37Updated 5 years ago
- ☆29Updated 5 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆49Updated last year
- Cluster Identity Predictor (R package implementation)☆18Updated 2 years ago
- ☆37Updated 3 years ago
- Building on material from Introduction to Single Cell RNA-Seq, this workshop aims to cover advanced topics, including TCR and trajectory …☆12Updated last year
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆35Updated 6 years ago
- ☆53Updated 3 years ago
- Clone identification from single-cell data☆59Updated 2 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 3 years ago
- ☆15Updated 2 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆53Updated 3 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆22Updated 4 years ago
- R package for specialised analysis of single cell data☆36Updated 2 years ago