PDBeurope / protvista-pdb
PDB ProtVista Viewer
☆10Updated last month
Related projects ⓘ
Alternatives and complementary repositories for protvista-pdb
- Predict the structure of immune receptor proteins☆46Updated this week
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆61Updated 3 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆23Updated 2 weeks ago
- Improved antibody structure-based design using inverse folding☆75Updated last month
- ☆15Updated last month
- Protein language model customized for antibodies☆62Updated 5 months ago
- Ultra-fast in-silico structure mutation☆32Updated last year
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆47Updated 6 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆23Updated last month
- ☆35Updated 2 weeks ago
- Adapting protein language models for structure-conditioned design☆34Updated 3 months ago
- A complete, open-source, end-to-end re-implementation of the Church Lab's low-N eUniRep in silico protein engineering pipeline presented …☆26Updated 4 years ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆23Updated 2 months ago
- ☆24Updated 4 years ago
- Tool for modelling the CDRs of antibodies☆45Updated last year
- Structure prediction of alternative protein conformations☆71Updated 2 months ago
- Directed evolution of proteins in sequence space with gradients☆67Updated 3 months ago
- PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)☆18Updated last year
- Results and data from the pilot round of the Protein Engineering Tournament☆23Updated this week
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆47Updated 3 months ago
- Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"☆30Updated 2 years ago
- ☆14Updated last week
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆41Updated 2 months ago
- random colab notebooks for biology☆21Updated 2 months ago
- ☆27Updated last week
- Contrastive learning harmonizing protein language models and natural language models☆23Updated 4 months ago
- VESPA is a simple, yet powerful Single Amino Acid Variant (SAV) effect predictor based on embeddings of the Protein Language Model ProtT5…☆30Updated 8 months ago
- Improved RNA Secondary Secondary Structure Prediction using Evolutionary Profile, Mutational Coupling and Two-dimensional Transfer Learni…☆25Updated 3 years ago
- ☆43Updated 2 weeks ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆80Updated this week