Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"
☆28Jul 6, 2023Updated 2 years ago
Alternatives and similar repositories for multi-omics-state-of-the-field
Users that are interested in multi-omics-state-of-the-field are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- marpyter - Marp for JupyterLab☆31Sep 16, 2025Updated 6 months ago
- Snakemake-like pipeline manager for reproducible Jupyter Notebooks☆17Oct 4, 2021Updated 4 years ago
- Python Modeling Interface☆14Mar 31, 2026Updated last week
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆36Jul 10, 2024Updated last year
- Benchmark interpretation of QSAR models☆14Aug 12, 2022Updated 3 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- An open-source automated peptide synthesizer based on Arduino and Python☆13Dec 19, 2025Updated 3 months ago
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆19Mar 7, 2020Updated 6 years ago
- Make coverage plots from bam files!☆14Mar 17, 2026Updated 3 weeks ago
- R package for metabolic enzyme enrichment anaylsis☆13Oct 24, 2025Updated 5 months ago
- CryoBoltz code for protein structure prediction with cryo-EM guidance. NeurIPS 2025.☆30Nov 30, 2025Updated 4 months ago
- Deep Learning Library for R☆12May 6, 2018Updated 7 years ago
- Interactive plotting of data annotated with molecule structures.☆12Nov 30, 2023Updated 2 years ago
- The Open Life Science Analysis Platform☆24Sep 16, 2025Updated 6 months ago
- ☆23Nov 28, 2025Updated 4 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆10May 22, 2019Updated 6 years ago
- Helpers for RQDA☆11Jun 1, 2023Updated 2 years ago
- A bioinformatics best-practice analysis pipeline for epitope prediction and annotation☆51Apr 1, 2026Updated last week
- A functional profiler for metagenomes using FracMinHash☆21Apr 3, 2026Updated last week
- fragbuilder is a tool to create, setup and analyze QM calculations on peptides.☆15Oct 31, 2014Updated 11 years ago
- Qiime2 snakemake pipeline☆20Dec 21, 2023Updated 2 years ago
- MetScale: snakemake workflows to scale metagenome analyses☆19May 15, 2025Updated 10 months ago
- ☆14Dec 7, 2021Updated 4 years ago
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆11Nov 22, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- A sequence-based pan model for peptide-MHC II binding affinity prediction.☆21May 16, 2022Updated 3 years ago
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Mar 31, 2023Updated 3 years ago
- Jupyter Notebook to demonstrate the use of Neural Networks for Transcription Factor Binding Site Prediction☆13Jun 20, 2017Updated 8 years ago
- Prediction of Antibody CDR and protein loop flexibility☆17Sep 17, 2025Updated 6 months ago
- Differential Count Data Analysis Toolbox☆61Feb 5, 2024Updated 2 years ago
- FiveThirtyEight 2020 Forecast Approximation☆11Nov 16, 2020Updated 5 years ago
- Synthetic mzML writer☆13Mar 10, 2025Updated last year
- Share Apache Arrow datasets between Python and R.☆19Mar 4, 2026Updated last month
- deep reinforcement learning using demonstrations to help solve Doom environments☆10Oct 16, 2017Updated 8 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Paper collection about de novo peptide Sequening☆23Feb 5, 2025Updated last year
- A deep learning model to predict anticancer peptides.☆24Jul 10, 2019Updated 6 years ago
- collection of mass spectrometry imaging workflows☆22Mar 17, 2026Updated 3 weeks ago
- An interpretation of Ampleforth for Blockstack☆22Apr 8, 2021Updated 5 years ago
- Query sequence database by HMMs arranged in predefined synteny structure☆14Apr 1, 2026Updated last week
- Interactive multi-omics data explorer to integrate and interactively explore transcripts, proteins and metabolites data.☆13Aug 7, 2025Updated 8 months ago
- Spatial Experiments raster - a rasterization preprocessing framework for scalable spatial omics data analysis☆19Apr 23, 2025Updated 11 months ago