Analyses for "State of the field in multi-omics research: from computational needs to data mining and sharing"
☆28Jul 6, 2023Updated 2 years ago
Alternatives and similar repositories for multi-omics-state-of-the-field
Users that are interested in multi-omics-state-of-the-field are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The materials for the Deep Learning in Biology workshop put on by Alex Lee, David Nicholson, and Ben Heil☆14Oct 30, 2020Updated 5 years ago
- Snakemake-like pipeline manager for reproducible Jupyter Notebooks☆17Apr 13, 2026Updated 2 months ago
- Python Modeling Interface☆14Jun 18, 2026Updated last week
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆37Jul 10, 2024Updated last year
- Benchmark interpretation of QSAR models☆14Aug 12, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An open-source automated peptide synthesizer based on Arduino and Python☆13Dec 19, 2025Updated 6 months ago
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆19Mar 7, 2020Updated 6 years ago
- Make coverage plots from bam files!☆15Mar 17, 2026Updated 3 months ago
- chemmodlab: A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models☆17Nov 20, 2025Updated 7 months ago
- Interactive plotting of data annotated with molecule structures.☆12Nov 30, 2023Updated 2 years ago
- CryoBoltz code for protein structure prediction with cryo-EM guidance. NeurIPS 2025.☆38Nov 30, 2025Updated 7 months ago
- ☆10Jun 19, 2026Updated last week
- Helpers for RQDA☆11Jun 1, 2023Updated 3 years ago
- fragbuilder is a tool to create, setup and analyze QM calculations on peptides.☆15Oct 31, 2014Updated 11 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Source code and data for "Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures…☆19Jul 3, 2024Updated last year
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆11Nov 22, 2024Updated last year
- Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)☆16Apr 13, 2026Updated 2 months ago
- Dockerized Version of the DiffDock model from MIT☆13May 22, 2023Updated 3 years ago
- BioMM: Biological-informed Multi-stage Machine learning framework for phenotype prediction using omics data☆14Jun 14, 2026Updated 2 weeks ago
- Prediction of Antibody CDR and protein loop flexibility☆17Sep 17, 2025Updated 9 months ago
- Differential Count Data Analysis Toolbox☆62Feb 5, 2024Updated 2 years ago
- Peptide library design☆23Sep 8, 2020Updated 5 years ago
- FiveThirtyEight 2020 Forecast Approximation☆11Nov 16, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Feature-aware Directed OrtholoG search☆14Jun 16, 2026Updated 2 weeks ago
- Synthetic mzML writer☆14Mar 10, 2025Updated last year
- Share Apache Arrow datasets between Python and R.☆19Mar 4, 2026Updated 3 months ago
- deep reinforcement learning using demonstrations to help solve Doom environments☆10Oct 16, 2017Updated 8 years ago
- An npm/browser module for easy matching XML and XPath to React Components and other stuff☆19Mar 14, 2023Updated 3 years ago
- A deep learning model to predict anticancer peptides.☆24Jul 10, 2019Updated 6 years ago
- Paper collection about de novo peptide Sequening☆24Feb 5, 2025Updated last year
- An interpretation of Ampleforth for Blockstack☆22Apr 8, 2021Updated 5 years ago
- Interactive multi-omics data explorer to integrate and interactively explore transcripts, proteins and metabolites data.☆13Aug 7, 2025Updated 10 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 3 years ago
- Spatial Experiments raster - a rasterization preprocessing framework for scalable spatial omics data analysis☆19Apr 23, 2025Updated last year
- ☆13Apr 20, 2026Updated 2 months ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆15May 12, 2025Updated last year
- A set of Jupyter notebooks for getting started with Clarity.☆12Feb 25, 2021Updated 5 years ago
- Programming for Biology Class @ CSHL 2022☆14Oct 4, 2024Updated last year
- Semantic text annotation tools using Wordnet and DBPedia☆14Dec 14, 2017Updated 8 years ago