Disease pathways in the human interactome
☆22Mar 20, 2018Updated 8 years ago
Alternatives and similar repositories for pathways
Users that are interested in pathways are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A project to capture biological pathway data from academic papers☆29Mar 24, 2025Updated last year
- A multi-reference network annotation tool to support omics analysis☆12May 31, 2022Updated 4 years ago
- Code to run OncoSig Analyses☆18Sep 30, 2020Updated 6 years ago
- ☆10Jun 29, 2021Updated 5 years ago
- ☆12Mar 23, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆13Jan 30, 2023Updated 3 years ago
- Disease Prediction by Cell-Free DNA Methylation☆11Feb 8, 2018Updated 8 years ago
- Python program, based on Prody, for pathogenicity prediction of human missense variants☆10Jun 29, 2021Updated 5 years ago
- R package for functionally scoring phosphorylation sites☆23Nov 3, 2019Updated 6 years ago
- Disease Gene Prioritization with Privileged Information and Heteroscedastic Dropout☆11Jan 28, 2021Updated 5 years ago
- An open-source, Web-based computer aided design (CAD) tool for synthetic biology built on the SBOL standard☆16Dec 22, 2022Updated 3 years ago
- code repo for Set2Gaussian☆17Jun 19, 2020Updated 6 years ago
- User-friendly extensions to the Disease Ontology☆20Sep 9, 2016Updated 10 years ago
- Predicting Protein – Ligand Interaction by using Deep Learning Models☆11Nov 13, 2018Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Python 2.7 package with examples for evaluating a network's ability to group a given node set in network proximity.☆34Mar 24, 2023Updated 3 years ago
- Mutational Signature Comprehensive Analysis Toolkit☆16Sep 27, 2026Updated last month
- ☆20Aug 6, 2019Updated 7 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Jan 24, 2023Updated 3 years ago
- SmuDGE: Semantic Disease Gene Embeddings☆11Jul 11, 2018Updated 8 years ago
- A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site☆12Nov 12, 2021Updated 4 years ago
- Structural space exploration of AlphaFold DB☆13Oct 8, 2021Updated 5 years ago
- ☆20Apr 25, 2021Updated 5 years ago
- Graph Embedding Evaluation / Code and Datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations" (Bi…☆231Apr 14, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python module for the easy handling and analysis of DNase-seq data☆38Jul 18, 2019Updated 7 years ago
- Data, results, and code accompanying the manuscript: "Supervised learning is an accurate method for network-based gene classification"☆10Nov 3, 2021Updated 4 years ago
- Sequence Tagging for Biomedical Extractive Question Answering (Bioinformatics'2020)☆10Jul 3, 2023Updated 3 years ago
- ☆38Oct 16, 2023Updated 3 years ago
- A Graph Neural Network Model for prediction of the effectiveness of a drug on a given cancer cell lines☆17Apr 3, 2023Updated 3 years ago
- Embedding Complexity In the Data Representation Instead of In the Model (arXiv:1802.04233)☆24Feb 14, 2018Updated 8 years ago
- A python package for pathway visualization☆38Nov 11, 2020Updated 5 years ago
- PETAL (ParallEl paThways AnaLyzer): a Python tool for deep biological pathway analysis☆37Dec 28, 2022Updated 3 years ago
- ☆12Dec 23, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Deep joint-leaning single-cell multi-omics model☆16Jun 27, 2022Updated 4 years ago
- Computational Analysis of Novel Drug Opportunities☆43Jul 23, 2026Updated 3 months ago
- ☆14Sep 2, 2026Updated last month
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆46Oct 10, 2025Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆36Oct 7, 2026Updated 3 weeks ago
- Robustness and applicability of transcription factor and pathway analysis tools on single-cell RNA-seq data☆30Mar 2, 2020Updated 6 years ago
- ☆12May 14, 2025Updated last year