NCI-GDC / gdc-docsLinks
Official repository for GDC User Guides in Markdown format
☆60Updated 2 weeks ago
Alternatives and similar repositories for gdc-docs
Users that are interested in gdc-docs are comparing it to the libraries listed below
Sorting:
- Python API for Xena Hub☆53Updated 2 years ago
- A centralized location for storing curated data from cBioPortal☆194Updated last week
- ☆45Updated last week
- Associations of genomic features, drugs and diseases☆48Updated 2 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆49Updated 2 years ago
- Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.☆118Updated 4 months ago
- Python packaging for CPTAC data☆102Updated last year
- TCGA-Assembler 2☆77Updated 7 years ago
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆86Updated last week
- MyGene.info: A BioThings API for gene annotations☆128Updated last month
- R package to analyze large-scale pharmacogenomic datasets.☆71Updated last week
- ARCHS4 RNA-seq processing scripts and web server pages.☆59Updated 4 years ago
- The analysis repository for the Open Pediatric Brain Tumor Atlas Project☆105Updated 2 years ago
- ☆147Updated 8 months ago
- BESCA (Beyond Single Cell Analysis) offers python functions for single-cell analysis☆50Updated 4 months ago
- GDC Data Transfer Tool☆151Updated 4 months ago
- Deep learning based processing of Atac-seq data☆131Updated 2 years ago
- Classifying tumor types based on Whole Genome Sequencing (WGS) data☆48Updated last year
- Code and documentation for the curation of cellxgene datasets☆50Updated this week
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆56Updated 4 months ago
- A continually expanding collection of cancer genomics notes and data☆108Updated 2 months ago
- Scripts to analyze TCGA data☆124Updated last year
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆33Updated 6 months ago
- Python biomart API☆68Updated 2 years ago
- Tutorials, workflows, and convenience scripts for Single Cell Portal☆50Updated last year
- Building classifiers using cancer transcriptomes across 33 different cancer-types☆120Updated 6 years ago
- Utilizing single-cell omics from patients tumor to predict response and resistance.☆71Updated 2 years ago
- Prize-Collecting Steiner Forests for Interactomes☆62Updated last year
- Disease Ontology Semantic and Enrichment analysis☆121Updated 2 weeks ago
- 🏺 Exploring novel tumor epitope identification☆36Updated 5 years ago