MontpellierRessourcesImagerie / imagej_macros_and_scriptsLinks
ImageJ macros and scripts written at the imaging facility MRI
☆34Updated 3 weeks ago
Alternatives and similar repositories for imagej_macros_and_scripts
Users that are interested in imagej_macros_and_scripts are comparing it to the libraries listed below
Sorting:
- Generate markdown notebooks from ImageJ Macro☆25Updated 4 years ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 9 months ago
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆13Updated 3 years ago
- A platform for compiling, analyzing, and exploring tracking data☆45Updated 4 months ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆26Updated 9 months ago
- ☆11Updated 3 months ago
- ☆20Updated 4 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated last week
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆80Updated 2 months ago
- ☆51Updated 2 months ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- Lectures for a napari training course☆50Updated last year
- StarDist plugin for ImageJ☆30Updated 3 years ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated 2 months ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- A collection of demonstration materials for MorphoLibJ.☆12Updated 2 years ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 2 months ago
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆63Updated last year
- An introduction to bioimage analysis - http://bioimagebook.github.io☆71Updated last week
- QuPath extension for Cellsparse☆19Updated 2 months ago
- ☆16Updated 11 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated last week
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆17Updated 2 weeks ago
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 weeks ago
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆140Updated last month
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆134Updated 5 years ago
- Commands and Classes for interfacing between Imaris and Fiji☆12Updated 9 months ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆73Updated 3 months ago
- MethodsJ2☆14Updated 3 years ago