tferr / ScriptsLinks
Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ
☆25Updated 3 years ago
Alternatives and similar repositories for Scripts
Users that are interested in Scripts are comparing it to the libraries listed below
Sorting:
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- ☆51Updated 7 months ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 8 years ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆25Updated last month
- A collection of demonstration materials for MorphoLibJ.☆12Updated 2 years ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 7 months ago
- A Board Game to teach co-localization analysis☆13Updated last year
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last month
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 8 months ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last year
- Lectures for a napari training course☆50Updated 2 years ago
- Browse your OMERO database from within napari.☆39Updated 3 weeks ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆34Updated 2 weeks ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Updated 3 weeks ago
- ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)☆19Updated 6 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆99Updated last week
- Multiple file format reading directly into napari using pure Python☆39Updated 2 months ago
- ☆13Updated 5 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated last month
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆20Updated 2 years ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- Detection of Molecules plugin for ImageJ: SMLM 2D/3D localizations, drift and chromatic aberration correction, etc☆15Updated 3 years ago
- ☆13Updated 5 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆78Updated last month
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 8 months ago
- Imagej toolset to ease hyperstacks visualization and handling☆23Updated last year
- ☆20Updated 2 months ago
- Particle tracking by solving linear assignment problem.☆61Updated 3 weeks ago
- StarDist plugin for ImageJ☆30Updated 3 years ago
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆135Updated 5 years ago