Alternatives and similar repositories for imagej-macros

Users that are interested in imagej-macros are comparing it to the libraries listed below

• kwolbachia / Visualization_toolset
  Imagej toolset to ease hyperstacks visualization and handling
  ☆22Updated 9 months ago
• sofroniewn / napari-training-course
  Lectures for a napari training course
  ☆50Updated last year
• quantixed / TrackMateR
  Analysis of TrackMate XML outputs in R
  ☆14Updated last week
• BiAPoL / imagej-macro-cheat-sheet
  ☆20Updated 4 years ago
• UU-cellbiology / ZstackDepthColorCode
  Z-stack Depth Colorcode ImageJ FIJI plugin
  ☆24Updated 4 years ago
• haesleinhuepf / imagejmacromarkdown
  Generate markdown notebooks from ImageJ Macro
  ☆25Updated 4 years ago
• DrHanLim / EzColocalization
  ☆11Updated 4 years ago
• CellMigrationLab / CellTracksColab
  A platform for compiling, analyzing, and exploring tracking data
  ☆45Updated 4 months ago
• elgw / deconwolf
  Deconvolution of widefield microscopy images and generation of point spread functions
  ☆48Updated 3 weeks ago
• MontpellierRessourcesImagerie / imagej_macros_and_scripts
  ImageJ macros and scripts written at the imaging facility MRI
  ☆34Updated 3 weeks ago
• cleterrier / Utils
  ☆10Updated 7 months ago
• guiwitz / neubias_academy_biapy
  NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter
  ☆63Updated last year
• UU-cellbiology / DoM_Utrecht
  Detection of Molecules plugin for ImageJ, Utrecht University
  ☆15Updated 2 years ago
• maurosilber / binlets
  Denoising via adaptive binning.
  ☆12Updated last year
• JaneliaSciComp / multifish
  EASI-FISH analysis pipeline for spatial transcriptomics
  ☆35Updated 7 months ago
• TheJacksonLaboratory / ezomero
  A module with convenience functions for writing Python code that interacts with OMERO.
  ☆45Updated last week
• haesleinhuepf / devbio-napari
  ☆51Updated 2 months ago
• WhoIsJack / python-bioimage-analysis-tutorial
  A self-explanatory, hands-on intro to bioimage analysis in python. Slightly outdated but still much liked by learners.
  ☆98Updated 2 years ago
• BIOP / EasyXT-FIJI
  Commands and Classes for interfacing between Imaris and Fiji
  ☆12Updated 9 months ago
• dwaithe / ONBI_image_analysis
  This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course
  ☆18Updated 7 years ago
• wbif-bristol / ImageJ-Fiji-Level-2-course
  Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…
  ☆13Updated 3 years ago
• RMS-DAIM / Python-for-Bioimage-Analysis
  This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…
  ☆134Updated 5 years ago
• OakesLab / AFT-Alignment_by_Fourier_Transform
  ☆16Updated 11 months ago
• fish-quant / big-fish
  Toolbox for the analysis of smFISH images.
  ☆68Updated last year
• macronucleus / Chromagnon
  Image correction software for chromatic shifts in fluorescence microscopic images
  ☆24Updated last month
• grishkam / QuickFigures
  QuickFigures is a toolset for creating scientific figures see publication for details
  ☆35Updated last year
• ries-lab / RiesPieces
  Recipes for open microscopy
  ☆12Updated 4 years ago
• Open-Science-Tools / nd2reader
  Pure Python library for reading NIS Elements ND2 images and metadata
  ☆47Updated 6 months ago
• PreibischLab / RS-FISH
  Tool for precise, interactive, fast and scalable FISH spot detection
  ☆49Updated 5 months ago
• ahklemm / ImageJMacro_Introduction
  A first intoduction to scripting in Fiji using the ImageJ Macro language.
  ☆26Updated 9 months ago