mkirchler / transferGWAS
Repository for transferGWAS, a deep learning method for performing genome-wide association studies on full medical imaging data.
☆11Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for transferGWAS
- Scripts for data processing☆41Updated 5 months ago
- Data and code to accompany our Nature publication☆43Updated 2 years ago
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆69Updated 3 weeks ago
- Methods for training and interpreting deep radiogenomic neural networks☆13Updated 4 years ago
- A pan-cancer platform for mutation prediction from routine histology☆67Updated 3 years ago
- ☆45Updated 2 years ago
- ☆47Updated 7 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆74Updated 3 years ago
- A set of codes to classify H&E slides using deep learning☆28Updated 2 years ago
- TCGA BLCA tmb prediction by Hongming Xu☆13Updated 4 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆19Updated 4 years ago
- ☆25Updated last year
- Survival Convolutional Neural Networks☆68Updated last year
- Deep learning on histopathology images.☆98Updated 3 years ago
- Pathway-based sparse deep neural network for survival analysis☆36Updated last year
- DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis☆21Updated 3 years ago
- ☆11Updated 5 years ago
- deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…☆50Updated 4 years ago
- Train a model to predict gene expression from histology slides.☆93Updated 2 years ago
- Deep Learning with Multimodal Representation for Pancancer Prognosis Prediction☆81Updated 5 years ago
- Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning☆32Updated 3 years ago
- Radiomics Analysis for Prediction of EGFR Mutations and Ki-67 Proliferation Index in Patients with Non-Small Cell Lung Cancer☆13Updated 2 years ago
- ☆14Updated 5 years ago
- ☆18Updated last year
- Pan-cancer tils analysis study by Hongming Xu☆13Updated 4 years ago
- HCC_Deep_learning☆18Updated 4 years ago
- Code from Foersch et al. (Under Construction / Development)☆35Updated last year
- A Python library for deep learning on whole-slide images☆50Updated 3 years ago
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆12Updated last year
- Multi-task deep learning framework for multi-omics data analysis☆40Updated 2 years ago