Alternatives and similar repositories for clustergrammer:

Users that are interested in clustergrammer are comparing it to the libraries listed below

• higlass / higlass
  Fast, flexible and extensible genome browser.
  ☆321Updated this week
• ismms-himc / clustergrammer2
  "Dimensionality-increasing" data visualization tool and interactive WebGL Jupyter widget built for single-cell data.
  ☆114Updated 2 years ago
• cytoscape / cytoscape-automation
  Collection of scripts that include programmatic io and control of Cytoscape
  ☆87Updated last month
• MaayanLab / biojupies
  Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.
  ☆114Updated 5 months ago
• brinkmanlab / GenomeD3Plot
  SVG based genome viewer written in javascript using D3
  ☆67Updated 7 years ago
• gosling-lang / gosling.js
  Grammar of Scalable Linked Interactive Nucleotide Graphics
  ☆174Updated this week
• GangCaoLab / CoolBox
  Jupyter notebook based genomic data visualization toolkit.
  ☆234Updated last week
• g2nb / igv-jupyter
  Extension for Jupyter which integrates igv.js
  ☆154Updated 2 years ago
• bxlab / bx-python
  Tools for manipulating biological data, particularly multiple sequence alignments
  ☆155Updated 7 months ago
• gosling-lang / gos
  A declarative interactive genomics visualization library for Python.
  ☆224Updated 2 months ago
• genome-spy / genome-spy
  A visualization grammar and GPU-accelerated toolkit for genomic data
  ☆181Updated 2 months ago
• calipho-sib / feature-viewer
  Library to visualize protein sequence features in javascript using D3 - From SIB CALIPHO group; neXtProt project
  ☆112Updated 7 months ago
• statgen / locuszoom
  A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.
  ☆158Updated 2 years ago
• VCG / upset
  UpSet - Visualizing Intersecting Sets
  ☆231Updated 3 years ago
• biothings / mygene.info
  MyGene.info: A BioThings API for gene annotations
  ☆124Updated last week
• openvax / varcode
  Library for manipulating genomic variants and predicting their effects
  ☆84Updated 9 months ago
• BaselAbujamous / clust
  Automatic and optimised consensus clustering of one or more heterogeneous datasets
  ☆166Updated 2 years ago
• nspies / genomeview
  An extensible python-based genomics visualization engine
  ☆144Updated last year
• vixis / angularplasmid
  DNA Plasmid Visualization Component using AngularJS
  ☆135Updated 8 years ago
• cmap / morpheus.js
  JavaScript matrix visualization and analysis
  ☆65Updated 8 months ago
• bgruening / docker-galaxy
  Docker Images tracking the stable Galaxy releases.
  ☆231Updated last month
• sebriois / biomart
  Python biomart API
  ☆65Updated last year
• Novartis / peax
  Peax is a tool for interactive visual pattern search and exploration in epigenomic data based on unsupervised representation learning wit…
  ☆68Updated 2 years ago
• stevekm / nextflow-demos
  Example Nextflow pipelines and programming techniques
  ☆105Updated 4 months ago
• dasmoth / dalliance
  Interactive web-based genome browser.
  ☆227Updated 5 years ago
• bioFAM / MOFA
  Multi-Omics Factor Analysis
  ☆241Updated 4 years ago
• genepattern / genepattern-notebook
  Platform for integrating genomic analysis with Jupyter Notebooks.
  ☆44Updated 8 months ago
• simon-anders / htseq
  HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.
  ☆124Updated 5 years ago
• vigsterkr / circos
  Circos is a software package for visualizing data and information. It visualizes data in a circular layout — this makes Circos ideal for …
  ☆76Updated 6 years ago
• broadinstitute / gtex-viz
  GTEx Visualizations
  ☆64Updated 3 years ago