MaayanLab / clustergrammerLinks
An interactive heatmap visualization built using D3.js
☆235Updated 2 years ago
Alternatives and similar repositories for clustergrammer
Users that are interested in clustergrammer are comparing it to the libraries listed below
Sorting:
- "Dimensionality-increasing" data visualization tool and interactive WebGL Jupyter widget built for single-cell data.☆118Updated 2 years ago
- Fast, flexible and extensible genome browser.☆332Updated last week
- UpSet - Visualizing Intersecting Sets☆237Updated 3 years ago
- Peax is a tool for interactive visual pattern search and exploration in epigenomic data based on unsupervised representation learning wit…☆68Updated 2 years ago
- Collection of scripts that include programmatic io and control of Cytoscape☆88Updated 6 months ago
- Reproducible machine learning analysis of gene expression and alternative splicing data☆126Updated 2 years ago
- SVG based genome viewer written in javascript using D3☆67Updated 7 years ago
- A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.☆319Updated 7 years ago
- A visualization grammar and GPU-accelerated toolkit for genomic data☆184Updated last month
- Grammar of Scalable Linked Interactive Nucleotide Graphics☆179Updated this week
- The Clustergrammer interactive Jupyter notebook widget☆47Updated 2 years ago
- JavaScript matrix visualization and analysis☆65Updated last year
- Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.☆117Updated 2 months ago
- A Python package for exploring and analysing genetic variation data☆299Updated 3 weeks ago
- GO enrichment with python -- pandas meets networkx☆88Updated 5 years ago
- Python utilities for Cytoscape and Cytoscape.js☆176Updated 3 years ago
- Interactive web-based genome browser.☆227Updated 6 years ago
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- A declarative interactive genomics visualization library for Python.☆229Updated 2 weeks ago
- MyGene.info: A BioThings API for gene annotations☆127Updated 3 weeks ago
- Chromosome visualization for the web☆306Updated 3 months ago
- Jupyter notebook based genomic data visualization toolkit.☆246Updated 4 months ago
- d3 library to build circular graphs☆525Updated last month
- Javascript library for visualizing genomics data with D3.☆19Updated 8 years ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆69Updated last week
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated last month
- GeneMANIA helps you predict the function of your favourite genes and gene sets.☆44Updated last year
- A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.☆162Updated 3 months ago
- Python library to access Gene Expression Omnibus Database (GEO)☆155Updated last year
- DEPRECATED. Please visit our new repository (cytoscape/cyREST)☆27Updated 8 years ago