MaayanLab / clustergrammer-py
A python module for the clustergrammer matrix visualization project that creates the JSON object for the front-end JavaScript portion of Clustergrammer.
☆12Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for clustergrammer-py
- Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data☆16Updated last year
- Plot categorical heatmaps with seaborn☆18Updated 2 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated last year
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 3 months ago
- Tools for munging genomic data☆21Updated 5 years ago
- This is a short response to the 2018 RFI on NIH Strategic Plan for Data Science☆16Updated 6 years ago
- ☆11Updated this week
- Framework for running text mining tools on latest publications. Main page at:☆14Updated 2 years ago
- Interactive visualizations for differential expression☆25Updated last year
- A pedagogical implementation of panel apps served up on a remote machine.☆14Updated 3 years ago
- kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths☆9Updated 7 years ago
- Target discovery platform for exploring rankings of genes, disease models, and other entities. @JKU-ICG @datavisyn☆12Updated 8 months ago
- Search public databases for given genotypic information☆10Updated 6 years ago
- Teaching data science☆8Updated 7 years ago
- The Clustergrammer interactive Jupyter notebook widget☆47Updated last year
- %conda magic for IPython☆28Updated 7 years ago
- A web application from the Raphael Lab for mutation annotation and genome interpretation.☆20Updated 6 years ago
- Snakemake-like pipeline manager for reproducible Jupyter Notebooks☆17Updated 3 years ago
- Recipes for bioinformatics analyses with scikit-bio☆41Updated 8 years ago
- jinja2-enabled jupyter notebooks☆35Updated 3 months ago
- We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testin…☆10Updated 5 years ago
- Getting and publishing data on the web using Python.☆9Updated 8 years ago
- bioinformatics visualization tools with pyviz/bokeh☆19Updated last year
- Python Optimal Leaf Ordering for Hierarchical Clustering☆21Updated 7 years ago
- Short course using RStudio for biological data analysis☆13Updated 2 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆9Updated 7 years ago
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆39Updated 3 years ago
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆16Updated last year
- Materials for GCB535 at Penn.☆20Updated 5 years ago
- ☆15Updated last year