Alternatives and similar repositories for GraphOmics:

Users that are interested in GraphOmics are comparing it to the libraries listed below

• GMOD / jbrowse-jupyter
  A python package for showing JBrowse views
  ☆25Updated last year
• loosolab / UROPA
  Universal RObust Peak Annotator
  ☆15Updated last year
• ncsa / NEAT
  NEAT (NExt-generation Analysis Toolkit) simulates next-gen sequencing reads and can learn simulation parameters from real data.
  ☆53Updated 2 weeks ago
• KnowEnG / SequencEnG
  An interactive learning resource for next-generation sequencing (NGS) techniques
  ☆28Updated 6 years ago
• Metaboverse / Metaboverse
  Visualization and analysis platform for metabolic data and network pattern recognition
  ☆39Updated 3 weeks ago
• quinlan-lab / pathoscore
  pathoscore evaluates variant pathogenicity tools and scores.
  ☆21Updated 3 years ago
• jambler24 / GenGraph
  A repository for the GenGraph toolkit for the creation and manipulation of graph genomes
  ☆51Updated 3 years ago
• gatk-workflows / gatk4-jupyter-notebook-tutorials
  This repository contains Jupyter Notebooks containing GATK Best Practices Workflows
  ☆26Updated 5 years ago
• devCellPy-Team / devCellPy
  devCellPy is a Python package designed for hierarchical multilayered classification of cells based on single-cell RNA-sequencing.
  ☆25Updated last year
• ncbi / pm4ngs
  Project Manager for NGS data analysis
  ☆30Updated 2 years ago
• lcdb / lcdb-wf
  Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis
  ☆23Updated 3 weeks ago
• Guannan-Wang / GOMCL
  GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions
  ☆20Updated last year
• galaxy-genome-annotation / docker-jbrowse
  Docker image of JBrowse Genome Browser
  ☆15Updated 4 years ago
• stevetsa / awesome-microbes
  List of computational resources for analyzing microbial sequencing data.
  ☆68Updated last year
• broadinstitute / adapt
  A package for designing activity-informed nucleic acid diagnostics for viruses.
  ☆31Updated 2 years ago
• gtrichard / deepStats
  deepStats: a stastitical toolbox for deeptools and genomic signals
  ☆34Updated 3 years ago
• mentatpsi / KEGG-Crawler
  A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.
  ☆20Updated last year
• ding-lab / somaticwrapper
  Detect somatic variants from tumor and normal WGS/WXS data
  ☆15Updated last month
• zwang-bioinformatics / GOGO
  An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms
  ☆17Updated 5 years ago
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆49Updated 5 years ago
• Novartis / DRUG-seq
  DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline
  ☆26Updated last month
• babelomics / babelomics
  ☆41Updated 6 years ago
• lichen-lab / MDeep
  ☆14Updated 5 years ago
• tbischler / PEAKachu
  Peak calling tool for CLIP-seq data
  ☆14Updated 4 years ago
• nf-core / scnanoseq
  Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics
  ☆34Updated this week
• kundajelab / training_camp
  Genetics training camp
  ☆21Updated 4 years ago
• grst / snakemake_nextflow_wdl
  simple comparison of snakemake, nextflow and cromwell/wdl
  ☆50Updated 4 years ago
• salbrec / seqQscorer
  ☆22Updated last year
• BIMSBbioinfo / maui
  Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit
  ☆49Updated last year
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆40Updated 8 years ago