metaspace2020 / Lithops-METASPACELinks
Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline
☆12Updated 2 years ago
Alternatives and similar repositories for Lithops-METASPACE
Users that are interested in Lithops-METASPACE are comparing it to the libraries listed below
Sorting:
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Updated 4 years ago
- MAss spectra alignment tool for MSI data☆19Updated 3 years ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆13Updated 2 weeks ago
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆24Updated 5 months ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Updated 2 years ago
- metabolomics data analysis platform☆21Updated 2 years ago
- G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics☆18Updated last year
- The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …☆13Updated 2 weeks ago
- A package to cluster and visualise MS/MS spectral data☆11Updated 4 years ago
- mzmine_documentation☆13Updated 3 weeks ago
- Converting LC−MS-based Untargeted Metabolomics Data into Image towards Clinical Diagnosis☆12Updated 2 years ago
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated last year
- Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.☆17Updated last year
- A Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases.☆16Updated last year
- ☆11Updated last year
- Group-DIA, a software for analyzing multiple DIA data files☆13Updated 8 years ago
- Toolkit for untargeted metabolomics profiling☆13Updated last month
- Official Edison Lab toolboxes and scripts for analyzing metabolomics data.☆14Updated 2 years ago
- metabolomics/lipidomics data processing☆10Updated 4 years ago
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆14Updated 2 years ago
- A point cloud based deep learning model for untargeted feature detection and quantification in profile LC-HRMS data☆28Updated 2 years ago
- Mass spectral library manager☆13Updated 5 years ago
- ☆15Updated 4 years ago
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆15Updated 2 months ago
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆15Updated this week
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆29Updated last year
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆21Updated 2 years ago
- Generate Dose-Response Curves in Python☆10Updated last month
- A spectacularly simple package for working with peptide sequences.☆12Updated last week
- A set of metabolomics tools for use in Galaxy☆11Updated 3 years ago