Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline
☆12Jul 6, 2023Updated 2 years ago
Alternatives and similar repositories for Lithops-METASPACE
Users that are interested in Lithops-METASPACE are comparing it to the libraries listed below
Sorting:
- Lithops application examples☆11Dec 19, 2024Updated last year
- Using Biological Signals for Mass Recalibration of Mass Spectrometry Imaging Data☆11Dec 10, 2021Updated 4 years ago
- ☆14Dec 27, 2022Updated 3 years ago
- Defined MRM transitions from untargeted metabolomics data☆11Nov 13, 2023Updated 2 years ago
- A package to cluster and visualise MS/MS spectral data☆11Feb 26, 2021Updated 5 years ago
- Prometheus collector and exporter for Slurm cluster metrics. A Slinky project.☆16Nov 7, 2025Updated 3 months ago
- Mass spectral library manager☆13Apr 9, 2020Updated 5 years ago
- Cloud engine and platform for metabolite annotation for imaging mass spectrometry☆56Updated this week
- Python client library for IBM Cloud VPC☆14Jan 22, 2026Updated last month
- MAss spectra alignment tool for MSI data☆20Jun 6, 2022Updated 3 years ago
- 5-day workshop on Metabolomics and Data Analysis☆18Sep 1, 2019Updated 6 years ago
- A multi-cloud framework for big data analytics and embarrassingly parallel jobs, that provides an universal API for building parallel app…☆359Feb 1, 2026Updated last month
- BerkeleyGW examples☆18Feb 23, 2024Updated 2 years ago
- scalable data movement in Exascale Supercomputers☆17Updated this week
- Repository for MetaboShiny, a novel R and RShiny based metabolomics data analysis package.☆17Feb 13, 2026Updated 2 weeks ago
- OpenAPI Golang client library for Slurm REST API. A Slinky project.☆22Updated this week
- Workflow for LC-MS feature analysis and spatial mapping☆20Jul 16, 2018Updated 7 years ago
- MPI Benchmark on AWS HPC cluster☆20Jan 31, 2020Updated 6 years ago
- CLI for the Serverless Supercomputer☆25Sep 17, 2025Updated 5 months ago
- An R package for non-targeted LC-MS metabolomics☆20Oct 31, 2025Updated 4 months ago
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆24Apr 25, 2025Updated 10 months ago
- bioinformatics for peter☆11Apr 8, 2025Updated 10 months ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆66Feb 10, 2026Updated 3 weeks ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆30Jul 19, 2024Updated last year
- Web-based software for visualization of molecular maps in 2D and 3D☆27Jul 31, 2023Updated 2 years ago
- ☆28Nov 30, 2023Updated 2 years ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆28Jun 4, 2025Updated 9 months ago
- Course repo for material related to CYPLAN 255 at UC Berkeley, Spring 2024☆11May 7, 2024Updated last year
- Create and deploy virtual-experiments - co-processing computational workflows☆10Jan 28, 2026Updated last month
- Anki decks for Technion courses☆13Apr 26, 2024Updated last year
- Metabolomics And Dereplication By Two-dimensional Experiments - MADByTE NMR Metabolomics Platform☆12Jul 23, 2025Updated 7 months ago
- Cloud Native Benchmarking of Foundation Models☆45Jul 31, 2025Updated 7 months ago
- Drug Response Prediction and Biomarker Discovery Using Multi-Modal Deep Learning☆14Apr 24, 2024Updated last year
- Homework for STAT 205A - Berkeley☆13Dec 9, 2014Updated 11 years ago
- Course Projects for CS 61B, the data structures class at UC Berkeley, Spring 2014☆10Oct 7, 2014Updated 11 years ago
- A Reproducible Untargeted Metabolomics Data Processing Pipeline☆11Mar 18, 2021Updated 4 years ago
- ext_mpi_collectives☆11Apr 1, 2025Updated 11 months ago
- Quickstart tutorial Prerequisites Before reading this tutorial you should know a bit of Python. If you would like to refresh your memory,…☆14Dec 14, 2021Updated 4 years ago
- Memory Topology for GPUs☆17Feb 13, 2026Updated 2 weeks ago