metaspace2020 / Lithops-METASPACELinks
Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline
☆12Updated last year
Alternatives and similar repositories for Lithops-METASPACE
Users that are interested in Lithops-METASPACE are comparing it to the libraries listed below
Sorting:
- Molecular docking workspace for virtual screening campaigns☆9Updated 3 years ago
- MAss spectra alignment tool for MSI data☆19Updated 3 years ago
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆10Updated 3 years ago
- Spectral library searching using approximate nearest neighbor techniques.☆43Updated last month
- Workflow for LC-MS feature analysis and spatial mapping☆19Updated 6 years ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆12Updated 3 years ago
- ☆15Updated 4 years ago
- The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …☆12Updated 2 weeks ago
- A package to cluster and visualise MS/MS spectral data☆11Updated 4 years ago
- Group-DIA, a software for analyzing multiple DIA data files☆13Updated 8 years ago
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆14Updated 6 months ago
- Dock Multiple Ligands with AutoDock Vina with one Command☆11Updated 7 years ago
- ☆11Updated 2 years ago
- a package for streamlined multidomain data integration and translation based on cross-modal autoencoders architectures☆29Updated last year
- Generate Dose-Response Curves in Python☆9Updated 4 months ago
- Defined MRM transitions from untargeted metabolomics data☆10Updated last year
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆15Updated 2 years ago
- Assigning precursor-product ion relationships in indiscriminant MS/MS data☆12Updated last month
- ☆23Updated 2 months ago
- ☆14Updated 2 years ago
- A small library to provide peak picking for software processing mass spectrometry data☆23Updated 6 months ago
- ☆16Updated 2 years ago
- AlphaViz is a cutting-edge browser-based interactive visualization tool allowing to visualize the processed mass spectrometry data acquir…☆32Updated last month
- ML models to convert molecules to ESI mass spectra and maybe back again☆9Updated 3 years ago
- A set of metabolomics tools for use in Galaxy☆11Updated 2 years ago
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆19Updated last year
- Python module for lipidomics LC MS/MS data analysis☆16Updated 11 months ago
- ☆34Updated last week
- Graphical user interface for de novo sequencing of tandem mass spectra☆14Updated last year
- ☆11Updated 11 months ago