LaRoccaRaphael / MSI_recalibrationLinks
Using Biological Signals for Mass Recalibration of Mass Spectrometry Imaging Data
☆11Updated 3 years ago
Alternatives and similar repositories for MSI_recalibration
Users that are interested in MSI_recalibration are comparing it to the libraries listed below
Sorting:
- collection of mass spectrometry imaging workflows☆15Updated 4 months ago
- ☆65Updated 8 months ago
- Sub-cellular spatial transcriptomics Cell Segmentation☆68Updated 2 years ago
- Multiple-choice microscopy pipeline☆135Updated 2 weeks ago
- CellProfiler tutorial pipelines and images☆96Updated 2 months ago
- Integrated pipeline for multiplexed image analysis☆97Updated 6 months ago
- Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications☆59Updated last year
- Cell Painting Gallery☆109Updated 3 weeks ago
- Optimizing the Cell Painting assay for image-based profiling☆21Updated 2 months ago
- Self-supervised models for encoding protein localization patterns from microscopy images☆77Updated 2 months ago
- Python package for processing image-based profiling data☆124Updated last week
- ☆55Updated 2 years ago
- Evaluating batch correction methods for image-based cell profiling☆14Updated 2 months ago
- Your Personal Assistant in Computational Bioimaging.☆44Updated 6 months ago
- ClusterMap for multi-scale clustering analysis of spatial gene expression☆46Updated 4 months ago
- Super-resolved spatial transcriptomics by deep data fusion☆74Updated 2 years ago
- MUSE is a deep learning approach characterizing tissue composition through combined analysis of morphologies and transcriptional states f…☆35Updated 3 years ago
- Python packaging for CPTAC data☆104Updated last year
- ☆142Updated 9 months ago
- Accessible and interoperable whole slide image analysis☆141Updated this week
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆51Updated 2 months ago
- scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images☆89Updated 3 weeks ago
- Spatial Single-Cell Analysis Toolkit☆99Updated 3 months ago
- A parser to read .imzML files with python☆46Updated 11 months ago
- An introduction to deepcell and deep learning☆153Updated 11 months ago
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆63Updated 5 months ago
- A pixel classification based multiplexed image segmentation pipeline☆101Updated last year
- Morphological profiling using deep learning☆119Updated 11 months ago
- ☆55Updated 8 months ago
- CODEX data processing code☆12Updated 3 months ago