Code for 'Topological and kernel-based microbial phenotype prediction from MALDI-TOF mass spectra'
☆12Apr 11, 2022Updated 4 years ago
Alternatives and similar repositories for maldi_PIKE
Users that are interested in maldi_PIKE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for the paper "Antimicrobial resistance prediction in clinical isolates through machine learning on MALDI-TOF mass spectra"☆48Oct 7, 2022Updated 3 years ago
- An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics☆19Updated this week
- Deep learning tools and models for MALDI-TOF mass spectra analysis☆29Jan 19, 2026Updated 6 months ago
- Reads data files acquired by MALDI-TOF MS on Bruker Daltonics machines of the *flex series☆14Oct 17, 2025Updated 9 months ago
- Software library for Maldi-Tof preprocessing and machine learning analysis.☆40May 9, 2023Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- rapid serotyping of Vibrio parahaemolyticus from whole genome sequencing data using serogroup-specific genes☆10Sep 2, 2021Updated 4 years ago
- ☆15Jan 27, 2022Updated 4 years ago
- Vignettes for Cardinal3 paper☆10Feb 20, 2023Updated 3 years ago
- The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.☆34Mar 23, 2021Updated 5 years ago
- R for Mass Spectrometry documentation☆15Jun 26, 2026Updated 3 weeks ago
- Interfacing R's Spectra package with the Python world.☆13May 12, 2026Updated 2 months ago
- Automated pipeline for whole bacterial genome analysis based on snakemake☆12May 16, 2022Updated 4 years ago
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 9 months ago
- Python wrapper for SIMION ion simulation software☆17Jun 26, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆14Jul 7, 2026Updated last week
- This is the git repository matching the Bioconductor package mzR: parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data…☆46Mar 31, 2026Updated 3 months ago
- ☆29Apr 10, 2025Updated last year
- a toolbox for metabolomic data analysis, visualization and ‘omic’ integration☆13Jun 21, 2018Updated 8 years ago
- EuBIC-MS Developers Meeting 2025 on Computational Mass Spectrometry☆11Nov 8, 2024Updated last year
- Reproducible research workshop RStudio and git demo repository☆11Nov 12, 2016Updated 9 years ago
- A Bioconductor/R package for longitudinal system suitability monitoring and quality control for proteomic experiments☆10Feb 7, 2026Updated 5 months ago
- Mass Spectrometry Tool☆27Jun 12, 2024Updated 2 years ago
- This repository contains scripts related to Surendran P, Stewart I et al. Nature Medicine 2022 "Rare and common genetic causes of chemica…☆19Jul 15, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Core Utils for Mass Spectrometry Data☆17May 11, 2026Updated 2 months ago
- A lightweight genetic algorithm library written in pure Python (currently only 3.x).☆12Mar 2, 2018Updated 8 years ago
- 个人科研笔记网站☆22Mar 29, 2025Updated last year
- DLL and SO from Bruker.☆12Feb 25, 2026Updated 4 months ago
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Jun 3, 2025Updated last year
- Mistle is a fast spectral search engine. It uses a fragment-indexing technique and SIMD intrinsics to match experimental MS2 spectra to l…☆16Oct 6, 2023Updated 2 years ago
- BioDWH2 is an easy-to-use, automated, graph-based data warehouse and mapping tool for bioinformatics and medical informatics.☆19Jun 23, 2026Updated 3 weeks ago
- Package to analyze Mass Spec Data☆12Aug 24, 2023Updated 2 years ago
- Quantitative Analysis of Mass Spectrometry Data☆68Oct 20, 2025Updated 9 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Toolbox for the processing and analysis of MALDI-MSI data☆15Sep 10, 2025Updated 10 months ago
- JS 2D colormap to color encode scatterplots☆14Oct 13, 2017Updated 8 years ago
- EuBIC 2023 developer's meeting☆13Jan 16, 2023Updated 3 years ago
- Central repository for the Multiplexed Tissue Imaging Workshop 2023.☆10Jan 9, 2023Updated 3 years ago
- Based on COMSOL Livelink for MATLAB☆21Dec 21, 2023Updated 2 years ago
- A tool integrates channel abundances from multiple TMT samples and exports a general report for downstream analysis.☆14Jun 25, 2026Updated 3 weeks ago
- Learn Julia in one workday!☆13Jan 7, 2020Updated 6 years ago