Multi-omics integration method using AE and GCN
☆41Jun 7, 2023Updated 3 years ago
Alternatives and similar repositories for MoGCN
Users that are interested in MoGCN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A deep-learning framework for multi-omics integration (RNA-seq, CNV, DNA methylation, etc.)☆32Updated this week
- ☆10Feb 3, 2020Updated 6 years ago
- Experimental evaluation and comparison of multi-omics data integration methods for cancer subtyping☆14Aug 13, 2021Updated 4 years ago
- MOMA: A Multi-task Attention Learning Algorithm for Multi-omics Data Interpretation and Classification☆19Apr 10, 2023Updated 3 years ago
- An explainable multi-omics graph integration method based on graph convolutional networks to predict cancer genes.☆164May 17, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- HyperTMO: A trusted multi-omics integration framework based on Hypergraph convolutional network for patient classification☆13Apr 1, 2024Updated 2 years ago
- End-to-end deep learning model for low dimensional latent space extraction and multi-class classification on multi-omics datasets.☆35Jun 30, 2021Updated 5 years ago
- Tutorial for slideio package☆14Mar 12, 2024Updated 2 years ago
- This R package for performing module repertoire analyses and generating fingerprint representations☆19Sep 16, 2021Updated 4 years ago
- ☆66Nov 14, 2023Updated 2 years ago
- A logistic regression model for testing differential abundance in compositional microbiome data☆13Jul 25, 2023Updated 2 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆50Jul 6, 2023Updated 2 years ago
- Code for spatial subclone paper☆18Jan 23, 2025Updated last year
- Python library for analyzing mass spectrometry proteomics data.☆15Mar 20, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Graph Neural Network model for survival analysis from multi-omics data☆14Mar 9, 2022Updated 4 years ago
- ☆16Jun 1, 2023Updated 3 years ago
- Multi-task deep learning framework for multi-omics data analysis☆53May 5, 2022Updated 4 years ago
- ☆22Feb 19, 2020Updated 6 years ago
- ☆11Feb 18, 2021Updated 5 years ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆58Mar 27, 2021Updated 5 years ago
- A Python wrapper for alvaDesc software☆10Oct 15, 2024Updated last year
- Code used to carry out parameter estimation, correlation estimation, type 1 error analysis, and power analysis for our "Pseudoreplication…☆21Sep 9, 2020Updated 5 years ago
- P-NET, Biologically informed deep neural network for prostate cancer classification and discovery☆167Nov 15, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Reference implementation of the HEAT algorithm described in https://link.springer.com/chapter/10.1007/978-3-030-62362-3_4☆11Mar 24, 2023Updated 3 years ago
- SUPREME: A GCN based approach for cancer subtype prediction☆18Aug 9, 2023Updated 2 years ago
- ☆11Apr 1, 2024Updated 2 years ago
- Ms2 basEd saMple vectOrization (memo) package☆17Jun 13, 2023Updated 3 years ago
- ☆10Dec 17, 2025Updated 6 months ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated 2 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆54Sep 22, 2020Updated 5 years ago
- Code accompanying "Direct detection of RNA modifications and structure using single molecule nanopore sequencing"☆13Sep 29, 2021Updated 4 years ago
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Oct 30, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆62May 19, 2025Updated last year
- ☆18Feb 3, 2023Updated 3 years ago
- ☆21Jan 13, 2026Updated 5 months ago
- Code repository site for manuscript: Unraveling the Heterogeneity of Tumor-Infiltrating Myeloid Cells in Immune Checkpoint Blockade: A Si…☆13Jun 24, 2023Updated 3 years ago
- ☆10Aug 3, 2023Updated 2 years ago
- ☆34Jan 18, 2023Updated 3 years ago
- Multi-Omics integration and VIsualization in Cancer Subtyping☆147Jul 19, 2021Updated 4 years ago