Alternatives and similar repositories for HuaSmallTools:

Users that are interested in HuaSmallTools are comparing it to the libraries listed below

• steuernb / NLR-Annotator
  NLR-Annotator upload
  ☆62Updated last year
• Sunhh / NGS_data_processing
  Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.
  ☆51Updated this week
• youngDouble / GO_KEGG_annotation
  GO KEGG annotation
  ☆30Updated 2 years ago
• SwiftSeal / resistify
  Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…
  ☆28Updated this week
• meiyang12 / Genome-annotation-pipeline
  Genome annotation pipeline
  ☆56Updated 6 months ago
• chenlianfu / geta
  ☆73Updated 6 months ago
• zhaotao1987 / SynNet-Pipeline
  Workflow for Building Microsynteny Networks
  ☆48Updated 2 years ago
• molevol-ub / bitacora
  BITACORA: A Bioinformatics tool for gene family annotation
  ☆44Updated 8 months ago
• irusri / Extract-intron-from-gff3
  This script will extract the intron feature gff3 and sequence from gene_exon gff3 and fasta file.
  ☆33Updated 6 years ago
• BGI-shenzhen / RectChr
  Multi-level visualization of genomic statistical variables on rectangular chromosomes
  ☆85Updated last month
• tsackton / ratite-genomics
  Scripts and other material for the assembly and analysis of ratite genomes.
  ☆26Updated 2 years ago
• HongboDoll / TomatoSuperPanGenome
  Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…
  ☆50Updated 7 months ago
• dePamphilis / PlantTribes
  PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics
  ☆34Updated last year
• Jwindler / AutoHiC
  A novel genome assembly pipeline based on deep learning
  ☆59Updated last month
• moshi4 / CafePlotter
  A tool for plotting CAFE5 gene family expansion/contraction result
  ☆27Updated last year
• fanagislab / GCE
  GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…
  ☆48Updated 4 years ago
• hewm2008 / BamDeal
  BamDeal: a comprehensive toolkit for bam manipulation
  ☆13Updated 2 years ago
• xtmtd / PLWS
  Phylogenomics from Low-coverage Whole-genome Sequencing
  ☆37Updated 4 years ago
• slt666666 / NLRtracker
  NLR annotation tool
  ☆23Updated 10 months ago
• jamiemcg / BUSCO_phylogenomics
  BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins
  ☆58Updated 3 months ago
• evolgeniusteam / EvolviewDocumentation
  Documentation for Evolview
  ☆26Updated 3 years ago
• nclark-lab / RERconverge
  Analysis of convergence between organismal traits and DNA/protein sequences
  ☆47Updated 6 months ago
• 4ureliek / Parsing-RepeatMasker-Outputs
  Few scripts facilitating the extraction of info from Repeat Masker .out files
  ☆78Updated 3 years ago
• YangJianshun / LINKVIEW2
  DNA序列比对结果 可视化展示工具
  ☆44Updated 2 years ago
• peterthorpe5 / public_scripts
  collection of bioinformatic scripts
  ☆30Updated 8 months ago
• wk8910 / bio_tools
  Useful bioinformatic scripts
  ☆53Updated last month
• PalMuc / TransPi
  TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly
  ☆26Updated 3 years ago
• obenno / ShinySyn
  A shiny application to visualize MCscan result
  ☆34Updated 2 years ago
• hewm2008 / RectChr
  Multi-level visualization of genomic statistical variables on rectangular chromosomes
  ☆38Updated last month
• byemaxx / callCodeml
  This is used to call Codeml to calculate the positive selection of gene in Branch-Sites Model.(Require codon sequence)
  ☆16Updated 3 years ago