A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.
☆17Jan 31, 2016Updated 10 years ago
Alternatives and similar repositories for ddg
Users that are interested in ddg are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Probabilistic Multi-Parameter Optimization (pMPO)☆17Apr 7, 2017Updated 9 years ago
- Metal and Water prediction☆14Feb 5, 2025Updated last year
- Computationally Restoring the Potency of a Clinical Antibody☆20Mar 1, 2024Updated 2 years ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆40Apr 29, 2026Updated 2 months ago
- Python code to automatically interact with PDBePISA web server☆10Jun 27, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- CATH: high-throughput protein structure/function annotations☆12Dec 17, 2019Updated 6 years ago
- ☆12Jun 19, 2018Updated 8 years ago
- A fast, programmable molecular viewer for research, scripting, and the web☆177Jun 22, 2026Updated last week
- A toolkit for predicting the binding mode of small molecules interacting with proteins based on interfacial rigidification, as assessed b…☆10Nov 22, 2016Updated 9 years ago
- Neurally-derived Potts models for protein design, inspired by dTERMen☆14Aug 23, 2022Updated 3 years ago
- Antibody Binding Mutational Database☆42Apr 10, 2019Updated 7 years ago
- A fork of Autodock Vina for DeltaVina scoring function☆10Nov 7, 2016Updated 9 years ago
- Combs repo associated with Lu et al 2024 Science paper☆17Sep 21, 2025Updated 9 months ago
- ☆156Aug 17, 2022Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Code used in the manuscript for De Novo Design of Bioactive Protein Switches☆17May 16, 2019Updated 7 years ago
- ☆20Jan 20, 2023Updated 3 years ago
- McDock: Simple Monte Carlo docking algorithm in C++☆11Feb 10, 2017Updated 9 years ago
- ☆17Oct 30, 2015Updated 10 years ago
- ☆54Apr 1, 2025Updated last year
- ☆63Apr 9, 2024Updated 2 years ago
- Utilities for working with the RDKit☆20Sep 5, 2016Updated 9 years ago
- ☆10Nov 10, 2023Updated 2 years ago
- ☆17Dec 13, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A novel approach to pose selection in protein-ligand docking based on graph theory.☆20Nov 22, 2016Updated 9 years ago
- ABC of chemoinformatics☆20Aug 3, 2018Updated 7 years ago
- Elastic Network Contact Model (coarse-grained Normal Mode Analysis software)☆14Jul 29, 2017Updated 8 years ago
- A thin wrapper around ProteinMPNN for convenient sampling without having to write out or consume files☆13Apr 29, 2024Updated 2 years ago
- PaCS-Toolkit: Optimized software utilities for PaCS-MD and following analysis☆28Dec 14, 2025Updated 6 months ago
- Imitation learning from multiple experts☆13Aug 29, 2022Updated 3 years ago
- Material to run the HADDOCK antibody-antigen modelling protocol☆23Apr 13, 2026Updated 2 months ago
- ☆21Jul 16, 2020Updated 5 years ago
- Hands-on with popular deep learning datasets and tasks☆13Apr 4, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Small_molecule_binder_design_use_pseudocycles☆25Nov 19, 2024Updated last year
- Analysis pipeline for quick ML analyses.☆11Oct 4, 2018Updated 7 years ago
- A drop-in replacement for Rosetta Relax☆29Jan 30, 2026Updated 5 months ago
- Matrix factorization and deep learning for molecular property prediction☆13Apr 4, 2019Updated 7 years ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Mar 7, 2025Updated last year
- biostat final exam data and code☆10Jun 12, 2020Updated 6 years ago
- A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dicti…☆81Updated this week