Materials for genome annotation sessions at the WORKSHOP ON GENOMICS, CESKY KRUMLOV
☆22Jan 19, 2026Updated 8 months ago
Alternatives and similar repositories for GenomeAnnotation_Workshop
Users that are interested in GenomeAnnotation_Workshop are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Workshop on Genomics - Genomics Adventure☆47Jan 22, 2026Updated 8 months ago
- tutorial on pggb☆40Jan 13, 2025Updated last year
- ☆18Jun 30, 2023Updated 3 years ago
- Generation of OrthoDB protein sets for gene prediction experiments☆11Aug 8, 2024Updated 2 years ago
- Tutorials on phylogenomic analyses for the ForBio Phylogenomics course☆45Mar 4, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Software package for estimating fine-scale recombination rate.☆19Jun 8, 2021Updated 5 years ago
- genomic variant frequency estimation☆12Sep 4, 2026Updated last month
- ☆13Mar 12, 2020Updated 6 years ago
- ☆36Jun 15, 2023Updated 3 years ago
- R package to draw syntenic plots in 3 different styles☆47Feb 2, 2026Updated 8 months ago
- R package for analysis of hybrids and hybrid zones☆21Sep 23, 2026Updated 3 weeks ago
- A genome-wide IM blockwise likelihood estimation toolkit☆20Jun 24, 2024Updated 2 years ago
- ZGA prokaryotic genome assembly and annotation pipeline☆13Sep 13, 2024Updated 2 years ago
- GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the sc…☆149Apr 13, 2026Updated 6 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Workshop materials for SFSU SCIP 2022.☆16Jun 6, 2022Updated 4 years ago
- parallelLastz: Running Lastz in parallel☆18Sep 13, 2026Updated last month
- Compute N50/NG50 and auN/auNG☆34Oct 7, 2023Updated 3 years ago
- ☆14Apr 14, 2026Updated 6 months ago
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆18Oct 4, 2022Updated 4 years ago
- General tools for genomic analyses.☆396Mar 25, 2026Updated 6 months ago
- circularMT creates pictures of the genomic arrangement of mitochondrial genomes☆18Jul 15, 2026Updated 3 months ago
- Automated pipeline for enrichment analysis in non-model organisms !☆17Feb 8, 2026Updated 8 months ago
- Recommended Graphtyper pipelines☆15Feb 22, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Se…☆22Updated this week
- Trim, Align to genome, Deduplicate, Realign WGS sequencing samples☆18Feb 23, 2026Updated 7 months ago
- Knowledge-based Identification of Pathway Enzymes (KIPEs) performs an automatic annotation of the flavonoid biosynthesis steps in a new t…☆17Jun 23, 2026Updated 3 months ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆26Nov 14, 2025Updated 11 months ago
- ☆11Nov 17, 2020Updated 5 years ago
- NGSEP is an integrated framework for analysis of short and long DNA high throughput sequencing reads. A complete list of functionalities …☆59Updated this week
- A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulatio…☆131Jun 18, 2026Updated 3 months ago
- A Nextflow DSL2 pipeline for pretext generation in curation☆14Oct 8, 2026Updated last week
- Domain based annotation of transposable elements☆25Jul 21, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆40Dec 28, 2021Updated 4 years ago
- This repo is designed as a step-by-step tutorial to teach RNA-seq analysis☆20Dec 21, 2025Updated 9 months ago
- The full-length Homology-based R-gene Prediction (HRP) pipeline to comprehensively identify full-length NB-LRR gene models within genome …☆11Jul 27, 2023Updated 3 years ago
- R package to explore active transposable elements with RNA-seq data☆20Nov 25, 2022Updated 3 years ago
- Quantifying Introgression via Branch Lengths☆59Sep 30, 2022Updated 4 years ago
- Distribution of TEs and their relationship to genes in host genome☆25Jun 20, 2023Updated 3 years ago
- Pipelines for using T2T genome as a reference☆15Dec 11, 2024Updated last year