Alternatives and similar repositories for GenomeAnnotation_Workshop:

Users that are interested in GenomeAnnotation_Workshop are comparing it to the libraries listed below

• PuttickMacroevolution / MCMCtreeR
  MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree
  ☆45Updated 5 years ago
• ForBioPhylogenomics / tutorials
  Tutorials on phylogenomic analyses for the ForBio Phylogenomics course
  ☆33Updated 11 months ago
• mennodejong1986 / SambaR
  SambaR: Snp datA Management and Basic Analyses in R
  ☆27Updated last week
• CMB-BNU / PloidyFrost
  reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph
  ☆16Updated last year
• obenno / ShinySyn
  A shiny application to visualize MCscan result
  ☆34Updated 2 years ago
• carolindahms / TreeMix
  Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…
  ☆30Updated 11 months ago
• hsigeman / findZX
  ☆19Updated 2 years ago
• Yandell-Lab / maker
  Genome Annotation Pipeline
  ☆35Updated 6 months ago
• GDKO / AvP
  Automatic evaluation of HGTs
  ☆26Updated 3 weeks ago
• clairemerot / physalia_adaptation_course
  ☆18Updated last year
• ShiuLab / PseudogenePipeline
  ☆38Updated last year
• slimsuite / chromsyn
  Chromosome-level synteny plotting using orthologous regions
  ☆29Updated 5 months ago
• tonig-evo / workshop-popgenome
  Tutorial about R package PopGenome
  ☆41Updated 5 years ago
• rtfcoimbra / Coimbra-et-al-2021_CurrBiol
  Code used to analyse WGS data of giraffe in Coimbra et al. 2021
  ☆11Updated last year
• Farre-lab / syntenyPlotteR
  R package to draw syntenic plots in 3 different styles
  ☆39Updated last year
• sudmantlab / loco-pipe
  loco-pipe is an automated Snakemake pipeline that streamlines a set of essential population genomic analyses for low-coverage whole genom…
  ☆16Updated 3 weeks ago
• ellenbell / FasTE
  A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…
  ☆27Updated 2 years ago
• heche-psb / wgd
  wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication
  ☆30Updated last week
• ThibaultLeroyFr / Intro2PopGenomics
  Leroy & Rougemont - “learning-by-doing” introduction to population genomics - scripts
  ☆19Updated 5 years ago
• popgenDK / SATC
  Sex assignment through coverage
  ☆17Updated 11 months ago
• HuffordLab / GenomeQC
  ☆32Updated 4 years ago
• andrewgull / MGERT
  Mobile Genetic Elements Retrieving Tool
  ☆15Updated 3 years ago
• esayyari / DiscoVista
  ☆38Updated last year
• simonhmartin / tutorials
  Tutorials on evolutionary genomics
  ☆42Updated 2 years ago
• zy-optimistic / GAEP
  A genome assembly assessment pipeline.
  ☆37Updated last year
• alachins / sweed
  Likelihood-based Selective Sweep Detection
  ☆37Updated last year
• clairemerot / angsd_pipeline
  ☆26Updated last year