KatherLab / HIALinks
Histopathology Image Analysis
☆92Updated 2 years ago
Alternatives and similar repositories for HIA
Users that are interested in HIA are comparing it to the libraries listed below
Sorting:
- ☆45Updated 2 years ago
- ☆55Updated 3 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆68Updated 2 years ago
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆104Updated 8 months ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆154Updated last year
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆139Updated 3 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆55Updated 2 years ago
- ☆62Updated 10 months ago
- ☆35Updated 2 years ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆30Updated last year
- ☆71Updated 4 years ago
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Updated last year
- This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…☆38Updated 2 months ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆80Updated last year
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆55Updated last year
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆61Updated 3 years ago
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆66Updated 2 years ago
- GPU-accelerated stain normalization command line tool☆22Updated last year
- ☆102Updated last year
- Histopathology Slides Preprocessing Pipeline☆42Updated 4 months ago
- Standardized benchmark for computational pathology foundation models.☆91Updated last month
- Code from Foersch et al. (Under Construction / Development)☆37Updated 2 years ago
- First commit☆62Updated 3 years ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆68Updated 6 months ago
- Some stain normalization code☆89Updated 2 years ago
- Pretrained model for self supervised histopathology☆120Updated 3 years ago
- ☆54Updated 2 years ago
- Deep learning enabled assessment of cardiac allograft rejection from endomyocardial biopsies- Nature Medicine☆32Updated 3 years ago
- Stain normalization tools for histological analysis and computational pathology☆149Updated 6 months ago
- Tools to build deep learning pipelines.☆104Updated 8 months ago