Alternatives and similar repositories for towards_large_pathology_fms

Users that are interested in towards_large_pathology_fms are comparing it to the libraries listed below

• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆106Updated 10 months ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆38Updated last year
• kaiko-ai / eva
  Evaluation framework for oncology foundation models (FMs)
  ☆130Updated this week
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆36Updated last year
• secrierlab / HistoMIL
  A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.
  ☆29Updated last year
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆80Updated last year
• owkin / HistoSSLscaling
  Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…
  ☆158Updated last year
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆86Updated last week
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆61Updated 3 years ago
• clemsgrs / hs2p
  Histopathology Slides Preprocessing Pipeline
  ☆42Updated 6 months ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆22Updated last year
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated this week
• georg-wolflein / pathology-foundation-models
  List of pathology feature extractors and foundation models
  ☆153Updated 4 months ago
• jopo666 / HistoEncoder
  ☆43Updated 10 months ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆54Updated 3 years ago
• open-pathology / awesome-pathology
  Awesome List of Digital and Computational Pathology Resources
  ☆79Updated 8 months ago
• EIDOSLAB / torchstain
  Stain normalization tools for histological analysis and computational pathology
  ☆153Updated 8 months ago
• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆81Updated last year
• vqdang / H2T
  ☆36Updated 2 years ago
• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated 2 years ago
• mahmoodlab / TriPath
  Analysis of 3D pathology samples using weakly supervised AI - Cell
  ☆106Updated 8 months ago
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆57Updated 2 years ago
• ozanciga / self-supervised-histopathology
  Pretrained model for self supervised histopathology
  ☆120Updated 3 years ago
• wenqi006 / SlideGraph
  ☆56Updated 3 years ago
• DIAGNijmegen / pathology-hooknet
  ☆64Updated last year
• mahmoodlab / Patho-Bench
  Standardized benchmark for computational pathology foundation models.
  ☆102Updated 2 months ago
• okunator / cellseg_models.pytorch
  Encoder-Decoder Cell and Nuclei segmentation models
  ☆95Updated last month
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆86Updated this week
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆66Updated 7 months ago
• digitalpathologybern / hover_next_train
  Training/Evaluation code for HoVer-NeXt
  ☆14Updated 9 months ago