kaiko-ai / towards_large_pathology_fmsLinks
This repository contains the official implementation of the research paper: "Towards Training Large-Scale Pathology Foundation Models: from TCGA to Hospital Scale"
☆33Updated 7 months ago
Alternatives and similar repositories for towards_large_pathology_fms
Users that are interested in towards_large_pathology_fms are comparing it to the libraries listed below
Sorting:
- Evaluation framework for oncology foundation models (FMs)☆118Updated this week
- A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.☆105Updated 9 months ago
- 🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images☆79Updated last year
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆36Updated last year
- Python 3 library for the augmentation & normalization of H&E images☆58Updated 2 years ago
- Pipeline for computational pathology☆38Updated last year
- Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…☆157Updated last year
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated 2 weeks ago
- Solid Tumor Associative Modeling in Pathology☆84Updated this week
- ☆42Updated 9 months ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆102Updated 7 months ago
- GrandQC tool for tissue detection and quality control in pathology☆61Updated 5 months ago
- Training/Evaluation code for HoVer-NeXt☆14Updated 7 months ago
- Encoder-Decoder Cell and Nuclei segmentation models☆93Updated last week
- Pretrained model for self supervised histopathology☆120Updated 3 years ago
- A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.☆30Updated last year
- Inference code for HoVer-NeXt☆38Updated 4 months ago
- ☆56Updated 3 years ago
- Stain normalization tools for histological analysis and computational pathology☆151Updated 7 months ago
- ☆35Updated 2 years ago
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Updated 2 years ago
- Hibou: Foundational Models for Pathology☆74Updated 10 months ago
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆83Updated last month
- Blazing fast nuclei segmentation for brightfield Whole Slide Images☆36Updated 6 months ago
- Histopathology Image Analysis☆92Updated 2 years ago
- ☆63Updated 11 months ago
- An open-source digital pathology based rapid image annotation tool☆82Updated last month
- Standardized benchmark for computational pathology foundation models.☆96Updated 3 weeks ago
- Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering☆107Updated 2 years ago
- GPU-accelerated stain normalization command line tool☆22Updated last year