Alternatives and similar repositories for towards_large_pathology_fms

Users that are interested in towards_large_pathology_fms are comparing it to the libraries listed below

• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆107Updated last month
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆84Updated last year
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆38Updated last year
• owkin / HistoSSLscaling
  Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…
  ☆163Updated last year
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆38Updated last year
• kaiko-ai / eva
  Evaluation framework for oncology foundation models (FMs)
  ☆142Updated last week
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆102Updated last week
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated this week
• mahmoodlab / TriPath
  Analysis of 3D pathology samples using weakly supervised AI - Cell
  ☆110Updated 10 months ago
• sebastianffx / stainlib
  Python 3 library for the augmentation & normalization of H&E images
  ☆62Updated 3 years ago
• georg-wolflein / pathology-foundation-models
  List of pathology feature extractors and foundation models
  ☆159Updated 6 months ago
• EIDOSLAB / torchstain
  Stain normalization tools for histological analysis and computational pathology
  ☆164Updated 3 weeks ago
• digitalpathologybern / hover_next_train
  Training/Evaluation code for HoVer-NeXt
  ☆15Updated last month
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆55Updated 3 years ago
• KatherLab / HIA
  Histopathology Image Analysis
  ☆93Updated 2 years ago
• mahmoodlab / Patho-Bench
  Standardized benchmark for computational pathology foundation models.
  ☆119Updated last month
• mahmoodlab / SISH
  Fast and scalable search of whole-slide images via self-supervised deep learning - Nature Biomedical Engineering
  ☆109Updated 2 years ago
• jopo666 / HistoEncoder
  ☆43Updated last year
• clemsgrs / hs2p
  Histopathology Slides Preprocessing Pipeline
  ☆42Updated this week
• cpath-ukk / grandqc
  GrandQC tool for tissue detection and quality control in pathology
  ☆75Updated 9 months ago
• mahmoodlab / MIL-Lab
  Feather - Lightweight supervised slide foundation models (ICML 2025)
  ☆119Updated 4 months ago
• okunator / cellseg_models.pytorch
  Encoder-Decoder Cell and Nuclei segmentation models
  ☆95Updated 3 weeks ago
• vqdang / H2T
  ☆37Updated 2 years ago
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆88Updated 3 weeks ago
• HistAI / hibou
  Hibou: Foundational Models for Pathology
  ☆75Updated last year
• secrierlab / HistoMIL
  A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.
  ☆29Updated last year
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆24Updated 2 years ago
• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆84Updated last year
• Sbrussee / PathBench-MIL
  PathBench-MIL: A comprehensive, flexible Benchmarking / AutoML framework for multiple instance learning in Histopathology
  ☆22Updated 2 months ago
• KatherLab / preProcessing
  ☆45Updated 2 years ago