Alternatives and similar repositories for iguana

Users that are interested in iguana are comparing it to the libraries listed below

• EIDOSLAB / torchstain
  Stain normalization tools for histological analysis and computational pathology
  ☆151Updated 8 months ago
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆69Updated 2 years ago
• trislaz / gigassl
  Repository for the Giga-SSL paper
  ☆25Updated 11 months ago
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆105Updated 9 months ago
• choosehappy / HoverFast
  Blazing fast nuclei segmentation for brightfield Whole Slide Images
  ☆36Updated 7 months ago
• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆81Updated last year
• wanghao14 / Stain_Normalization
  Some stain normalization code
  ☆90Updated 2 years ago
• georg-wolflein / pathology-foundation-models
  List of pathology feature extractors and foundation models
  ☆151Updated 3 months ago
• Xiyue-Wang / RetCCL
  ☆101Updated last year
• wenqi006 / SlideGraph
  ☆56Updated 3 years ago
• histocartography / zoommil
  ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…
  ☆66Updated 2 years ago
• khtao / StainNet
  StainNet: a fast and robust stain normalization network
  ☆51Updated 3 years ago
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆57Updated 2 years ago
• okunator / cellseg_models.pytorch
  Encoder-Decoder Cell and Nuclei segmentation models
  ☆92Updated 3 weeks ago
• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated 2 years ago
• DIAGNijmegen / pathology-hooknet-tls
  ☆24Updated 9 months ago
• Sbrussee / PathBench-MIL
  PathBench-MIL: A comprehensive, flexible Benchmarking / AutoML framework for multiple instance learning in Histopathology
  ☆19Updated last month
• John-P / wsic
  Whole Slide image (WSI) conversion for brightfield histology images
  ☆36Updated last month
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆38Updated last year
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆36Updated last year
• DIAGNijmegen / pathology-hooknet
  ☆63Updated 11 months ago
• vqdang / H2T
  ☆36Updated 2 years ago
• ozanciga / self-supervised-histopathology
  Pretrained model for self supervised histopathology
  ☆120Updated 3 years ago
• agentdr1 / LA_MIL
  Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch
  ☆24Updated last year
• SBU-BMI / wsinfer
  🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images
  ☆80Updated last year
• aimagelab / mil4wsi
  DAS-MIL: Distilling Across Scales for MILClassification of Histological WSIs
  ☆61Updated 9 months ago
• TissueImageAnalytics / cerberus
  One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification
  ☆92Updated 9 months ago
• superhy / LCSB-MIL
  source code of Inter-MIL: self-interactive multi-instance learning
  ☆14Updated 2 years ago
• mahmoodlab / Patch-GCN
  Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021
  ☆155Updated last year
• PathologyDataScience / HiPS
  Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis
  ☆32Updated last year