Isy89 / LBFLinks
☆13Updated 9 months ago
Alternatives and similar repositories for LBF
Users that are interested in LBF are comparing it to the libraries listed below
Sorting:
- Genomic coordinates of problematic genomic regions as GRanges☆41Updated 7 months ago
- A Python-based EGA download client☆101Updated 10 months ago
- A flexible framework for nucleosome profiling of cell-free DNA☆27Updated last year
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- R package containing useful functions for mutational signature analysis☆82Updated this week
- simple comparison of snakemake, nextflow and cromwell/wdl☆50Updated 4 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆84Updated last month
- ☆73Updated 4 years ago
- CoMut is a Python library for visualizing genomic and phenotypic information via comutation plots☆94Updated 11 months ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 6 years ago
- ☆69Updated 2 years ago
- ☆50Updated 4 years ago
- A tool for bigWig files.☆119Updated 7 years ago
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆68Updated this week
- Tools for making plots of genomic datasets in a genome-browser-like format☆32Updated 7 months ago
- Unsorted scripts for bioinformatics☆61Updated 4 years ago
- ☆21Updated last week
- Python OncoPrint library based on Matplotlib☆24Updated 10 months ago
- A comprehensive cancer DNA/RNA analysis and reporting pipeline☆76Updated this week
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆115Updated 5 months ago
- ☆49Updated 3 years ago
- Estimation of Promoter Activity from RNA-Seq data☆53Updated this week
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated last year
- ☆30Updated last year
- Clinical interpretation of somatic mutations in cancer☆47Updated 4 months ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆69Updated 4 months ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆23Updated 6 months ago
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆66Updated 5 years ago
- Genomic data interpretation and visualization Workshop☆21Updated last month