Illumina / SpliceAILinks
A deep learning-based tool to identify splice variants
☆440Updated last year
Alternatives and similar repositories for SpliceAI
Users that are interested in SpliceAI are comparing it to the libraries listed below
Sorting:
- python module to plot beautiful and highly customizable genome browser tracks☆813Updated 10 months ago
- Fast genome-wide functional annotation through orthology assignment☆622Updated last year
- ENCODE ATAC-seq pipeline☆418Updated 10 months ago
- HiC-Pro: An optimized and flexible pipeline for Hi-C data processing☆406Updated last year
- Tools for handling Unique Molecular Identifiers in NGS data sets☆510Updated 3 months ago
- MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.☆356Updated 3 weeks ago
- Application for making ENCODE Blacklists☆309Updated 4 years ago
- Package for fetching metadata and downloading data from SRA/ENA/GEO☆329Updated 3 months ago
- A tool to map bisulfite converted sequence reads and determine cytosine methylation states☆422Updated last month
- Genome-scale protein function classification☆327Updated this week
- Automatically exported from code.google.com/p/cdhit☆676Updated 2 years ago
- GTEx & TOPMed data production and analysis pipelines☆369Updated last week
- Performant Pythonic GenomicRanges☆471Updated 2 months ago
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆170Updated 4 years ago
- A One-Click System for Analyzing Loop-Resolution Hi-C Experiments☆443Updated 6 months ago
- Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute☆227Updated last month
- Plot structural variant signals from many BAMs and CRAMs☆543Updated 10 months ago
- ☆277Updated 3 months ago
- De novo assembler for single molecule sequencing reads using repeat graphs☆837Updated last month
- A tool to find sequencing data and metadata from public databases.☆576Updated 9 months ago
- Intro to ChIPseq using HPC☆307Updated 2 years ago
- Customizable workflows based on snakemake and python for the analysis of NGS data☆397Updated this week
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆514Updated 2 months ago
- Prodigal Gene Prediction Software☆486Updated last year
- Transcript assembly and quantification for RNA-Seq☆441Updated 3 weeks ago
- A python extension for quick access to bigWig and bigBed files☆231Updated 4 months ago
- ☆248Updated last year
- RSEM: accurate quantification of gene and isoform expression from RNA-Seq data☆442Updated last year
- A genome visualization python package for comparative genomics☆330Updated 3 weeks ago
- genes and genomes at your fingertips☆391Updated 3 weeks ago