Illumina / SpliceAILinks
A deep learning-based tool to identify splice variants
☆474Updated 5 months ago
Alternatives and similar repositories for SpliceAI
Users that are interested in SpliceAI are comparing it to the libraries listed below
Sorting:
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆328Updated last week
- python module to plot beautiful and highly customizable genome browser tracks☆854Updated last year
- Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute☆243Updated 2 months ago
- MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.☆378Updated last week
- genes and genomes at your fingertips☆406Updated 2 months ago
- ENCODE ATAC-seq pipeline☆438Updated last year
- Tools to process and analyze deep sequencing data.☆747Updated 4 months ago
- Performant Pythonic GenomicRanges☆491Updated last month
- Tools for handling Unique Molecular Identifiers in NGS data sets☆535Updated 5 months ago
- Graph-based alignment (Hierarchical Graph FM index)☆520Updated 3 months ago
- HiC-Pro: An optimized and flexible pipeline for Hi-C data processing☆429Updated last year
- Fast genome-wide functional annotation through orthology assignment☆679Updated 6 months ago
- Customizable workflows based on snakemake and python for the analysis of NGS data☆396Updated last week
- A python extension for quick access to bigWig and bigBed files☆238Updated 11 months ago
- Sequential regulatory activity predictions with deep convolutional neural networks.☆459Updated 7 months ago
- Efficient pythonic random access to fasta subsequences☆478Updated 3 months ago
- A collection of tools for Hi-C data analysis☆626Updated last month
- A One-Click System for Analyzing Loop-Resolution Hi-C Experiments☆471Updated 3 months ago
- Automatically exported from code.google.com/p/cdhit☆710Updated 3 years ago
- Bioinformatics code libraries and scripts☆551Updated 4 months ago
- GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more☆447Updated 11 months ago
- A tool to find sequencing data and metadata from public databases.☆591Updated last year
- GTEx & TOPMed data production and analysis pipelines☆390Updated 3 months ago
- a python package for fast random access to sequences from plain and gzipped FASTA/Q files☆289Updated 11 months ago
- A tool to map bisulfite converted sequence reads and determine cytosine methylation states☆438Updated 4 months ago
- A quality control analysis tool for high throughput sequencing data☆557Updated 3 weeks ago
- The ViennaRNA Package☆374Updated last week
- The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants☆514Updated last week
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆169Updated 2 months ago
- Transcript assembly and quantification for RNA-Seq☆473Updated last month