Illumina / SpliceAILinks
A deep learning-based tool to identify splice variants
☆457Updated last month
Alternatives and similar repositories for SpliceAI
Users that are interested in SpliceAI are comparing it to the libraries listed below
Sorting:
- python module to plot beautiful and highly customizable genome browser tracks☆835Updated last year
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆314Updated last week
- MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.☆374Updated last month
- Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute☆236Updated last month
- Tools for handling Unique Molecular Identifiers in NGS data sets☆517Updated last month
- Fast genome-wide functional annotation through orthology assignment☆645Updated 2 months ago
- Tools to process and analyze deep sequencing data.☆734Updated last month
- genes and genomes at your fingertips☆399Updated 3 months ago
- GTEx & TOPMed data production and analysis pipelines☆378Updated 2 months ago
- Customizable workflows based on snakemake and python for the analysis of NGS data☆396Updated 3 weeks ago
- Automatically exported from code.google.com/p/cdhit☆693Updated 2 years ago
- Efficient pythonic random access to fasta subsequences☆479Updated last week
- Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing☆470Updated this week
- ENCODE ATAC-seq pipeline☆427Updated last year
- A python extension for quick access to bigWig and bigBed files☆233Updated 7 months ago
- Graph-based alignment (Hierarchical Graph FM index)☆509Updated 9 months ago
- Performant Pythonic GenomicRanges☆483Updated 5 months ago
- RSEM: accurate quantification of gene and isoform expression from RNA-Seq data☆450Updated last year
- Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).☆267Updated 3 months ago
- A tool to find sequencing data and metadata from public databases.☆584Updated last year
- HiC-Pro: An optimized and flexible pipeline for Hi-C data processing☆419Updated last year
- A quality control analysis tool for high throughput sequencing data☆526Updated 2 weeks ago
- The ViennaRNA Package☆357Updated last month
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆161Updated last year
- Genome-scale protein function classification☆343Updated 2 weeks ago
- A collection of tools for Hi-C data analysis☆605Updated last month
- A tool to map bisulfite converted sequence reads and determine cytosine methylation states☆431Updated 3 weeks ago
- Sequential regulatory activity predictions with deep convolutional neural networks.☆447Updated 3 months ago
- Python library to handle Gene Ontology (GO) terms☆851Updated 3 months ago
- Bioinformatics code libraries and scripts☆542Updated last month