☆23Sep 21, 2021Updated 4 years ago
Alternatives and similar repositories for RepeatCatalogs
Users that are interested in RepeatCatalogs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for visualizing alignments of reads in regions containing tandem repeats☆92Apr 20, 2026Updated 3 months ago
- A tool that lets you quickly flip through images in a local directory and record notes or answer questions about each one.☆22Jul 23, 2026Updated 3 weeks ago
- A tool for estimating repeat sizes☆217Jan 30, 2024Updated 2 years ago
- TRGT Repeat expansion summary☆10Apr 10, 2023Updated 3 years ago
- ☆35Apr 20, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆15Jul 21, 2022Updated 4 years ago
- A tool for diagnosing SMA in exome, genome or targeted sequencing data☆13Jul 1, 2026Updated last month
- Tandem repeat genotyping and visualization from PacBio HiFi data☆142Jun 10, 2026Updated 2 months ago
- A lightweight, alignment-free utility for detecting repeat-containing reads in short-read WGS, WES and RNA-seq data.☆19Jan 16, 2026Updated 6 months ago
- Short Tandem Repeat disease loci resource☆29Aug 5, 2026Updated last week
- A CNN model to identify MEIs in WGS☆14Mar 4, 2025Updated last year
- VCF files of SVs using long-read sequencing (LRS).☆22Dec 17, 2021Updated 4 years ago
- Pre-mAsking Long reads for Mobile Element inseRtion☆10Feb 27, 2023Updated 3 years ago
- PanGenome Graph Building with the first 100 assemblies from the 1000G ONT Sequencing Consortium☆14Apr 5, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Code for building and testing variant ranking strategies☆18Apr 13, 2026Updated 4 months ago
- ☆24Jul 29, 2025Updated last year
- Data and information about the Polaris study☆56Nov 18, 2019Updated 6 years ago
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆42Apr 22, 2026Updated 3 months ago
- A machine learning tool to predict tandem repeat pathogenicity☆12Jan 2, 2024Updated 2 years ago
- Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation☆24Jul 12, 2026Updated last month
- De novo tandem repeat calling from PacBio HiFi data☆19Dec 5, 2025Updated 8 months ago
- A tool for profiling long STRs from short reads☆107Apr 19, 2021Updated 5 years ago
- Tandem repeat genotyping from long reads☆26Aug 3, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆18Nov 26, 2019Updated 6 years ago
- Working space for the GIAB TR benchmarking project☆24Oct 24, 2024Updated last year
- Dynamic time warping of Oxford Nanopore squiggle data to characterize tandem repeats.☆32Jul 2, 2020Updated 6 years ago
- Tandem repeat genotyping with long reads☆38Sep 23, 2025Updated 10 months ago
- Tandem repeat expansion detection or genotyping from long-read alignments☆170Mar 25, 2026Updated 4 months ago
- ☆41Jul 3, 2025Updated last year
- An easy-to-use python package can be used for genomic visual analysis☆23Apr 20, 2024Updated 2 years ago
- Tandem Repeats Caller for LOng Reads☆17May 28, 2021Updated 5 years ago
- Structural variant pipeline☆18Jun 25, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Alignment-based Scrubbing pipeline☆21Mar 14, 2024Updated 2 years ago
- Mutation rate analysis of autosomal loci☆15Jun 25, 2020Updated 6 years ago
- Selective and Recursive local Assembler☆15Jan 31, 2022Updated 4 years ago
- Miscellaneous scripts for applications of PacBio systems☆27Apr 19, 2022Updated 4 years ago
- Variant quality checking scripts.☆12Feb 4, 2016Updated 10 years ago
- ☆20Mar 31, 2021Updated 5 years ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆49Oct 22, 2024Updated last year