Illumina / RepeatCatalogs
☆20Updated 3 years ago
Alternatives and similar repositories for RepeatCatalogs:
Users that are interested in RepeatCatalogs are comparing it to the libraries listed below
- ☆39Updated 8 months ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆46Updated 4 years ago
- Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data☆48Updated 3 years ago
- ☆79Updated 8 months ago
- Structural Variant Index☆70Updated last month
- Set of tools to manipulate and visualize modified base bam files☆49Updated 2 years ago
- ☆22Updated 3 years ago
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆31Updated last month
- ☆39Updated 4 months ago
- Code for phasing SVs with SNPs☆52Updated 4 years ago
- DEPRECATED - Workflow for the comprehensive detection and prioritization of variants in human genomes with PacBio HiFi reads☆38Updated last year
- Data and information about the Polaris study☆53Updated 5 years ago
- Somatic structural variant caller for long-read data☆53Updated this week
- Tandem repeat genotyping and visualization from PacBio HiFi data☆113Updated last month
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆66Updated 4 months ago
- heuristics to merge structural variant calls in VCF format.☆35Updated 8 years ago
- ENCODE long read RNA-seq pipeline☆44Updated 2 years ago
- Toolkit for calling structural variants using short or long reads☆100Updated this week
- Human reference genome analysis sets☆50Updated last year
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆97Updated 3 years ago
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆77Updated 2 years ago
- UCSC Nanopore☆43Updated 5 years ago
- Structural Variants Pipeline for Long Reads☆44Updated 6 years ago
- ☆48Updated 6 months ago
- Variant annotation and merging pipeline☆31Updated last week
- Fast and accurate coordinate conversion between assemblies☆112Updated 3 months ago
- Methylation Phasing for Nanopore Sequencing☆45Updated last year
- Simple pileup-based variant caller☆85Updated 9 months ago
- Structural variant caller for real-time long-read sequencing data☆56Updated 2 years ago
- Read visualizer for structural variants☆81Updated 6 years ago