☆23Sep 21, 2021Updated 5 years ago
Alternatives and similar repositories for RepeatCatalogs
Users that are interested in RepeatCatalogs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for visualizing alignments of reads in regions containing tandem repeats☆92Apr 20, 2026Updated 6 months ago
- TRGT Repeat expansion summary☆10Apr 10, 2023Updated 3 years ago
- A lightweight, alignment-free utility for detecting repeat-containing reads in short-read WGS, WES and RNA-seq data.☆19Jan 16, 2026Updated 9 months ago
- A tool for estimating repeat sizes☆219Jan 30, 2024Updated 2 years ago
- A tool that lets you quickly flip through images in a local directory and record notes or answer questions about each one.☆23Jul 23, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A deletion and duplication caller from NGS paired-end data.☆14Aug 22, 2025Updated last year
- Tandem repeat genotyping and visualization from PacBio HiFi data☆145Jun 10, 2026Updated 4 months ago
- ☆36Apr 20, 2026Updated 6 months ago
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆42Updated this week
- A machine learning tool to predict tandem repeat pathogenicity☆12Jan 2, 2024Updated 2 years ago
- A tool for diagnosing SMA in exome, genome or targeted sequencing data☆14Jul 1, 2026Updated 4 months ago
- De novo tandem repeat calling from PacBio HiFi data☆19Oct 1, 2026Updated last month
- ☆15Jul 21, 2022Updated 4 years ago
- Data and information about the Polaris study☆56Nov 18, 2019Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A tool for profiling long STRs from short reads☆107Apr 19, 2021Updated 5 years ago
- An insertion caller for Illumina paired-end WGS data.☆26Aug 22, 2025Updated last year
- VCF files of SVs using long-read sequencing (LRS).☆22Dec 17, 2021Updated 4 years ago
- Short Tandem Repeat disease loci resource☆30Updated this week
- Pre-mAsking Long reads for Mobile Element inseRtion☆10Feb 27, 2023Updated 3 years ago
- Dynamic time warping of Oxford Nanopore squiggle data to characterize tandem repeats.☆32Jul 2, 2020Updated 6 years ago
- Detect novel (and reference) STR expansions from short-read data☆72Dec 6, 2025Updated 10 months ago
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆76Jun 26, 2023Updated 3 years ago
- Tandem Repeats Caller for LOng Reads☆17May 28, 2021Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆57Jan 11, 2023Updated 3 years ago
- PanGenome Graph Building with the first 100 assemblies from the 1000G ONT Sequencing Consortium☆14Apr 5, 2025Updated last year
- A tool for motif annotation and visualization in tandem repeats.☆15Oct 23, 2026Updated last week
- ☆11May 12, 2026Updated 5 months ago
- Browser-based tool for visualizing and analyzing germline copy number variants in genomic data☆12Nov 7, 2024Updated last year
- A python library for decomposing and visualizing tandem repeat sequences☆11May 26, 2026Updated 5 months ago
- Code for building and testing variant ranking strategies☆18Apr 13, 2026Updated 6 months ago
- AI-MARRVEL (AIM) is an AI system for rare genetic disorder diagnosis☆23May 12, 2026Updated 5 months ago
- ☆20Mar 6, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆25Jul 29, 2025Updated last year
- Tandem repeat expansion detection or genotyping from long-read alignments☆174Mar 25, 2026Updated 7 months ago
- A CNN model to identify MEIs in WGS☆14Mar 4, 2025Updated last year
- Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation☆24Updated this week
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆18Nov 26, 2019Updated 6 years ago
- Method for detecting STR expansions from short-read sequencing data☆63Dec 15, 2021Updated 4 years ago
- Expanded STR algorithm for Illumina sequencing data☆24Sep 11, 2022Updated 4 years ago