Illumina / RepeatCatalogs
☆21Updated 3 years ago
Alternatives and similar repositories for RepeatCatalogs:
Users that are interested in RepeatCatalogs are comparing it to the libraries listed below
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆47Updated 4 years ago
- ☆39Updated 11 months ago
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆32Updated 3 weeks ago
- Set of tools to manipulate and visualize modified base bam files☆52Updated 2 years ago
- ☆39Updated 6 months ago
- ☆79Updated last month
- heuristics to merge structural variant calls in VCF format.☆36Updated 8 years ago
- Structural Variant Index☆72Updated 3 months ago
- Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data☆50Updated 4 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆41Updated last year
- Variant annotation and merging pipeline☆32Updated 2 months ago
- Data and information about the Polaris study☆53Updated 5 years ago
- ☆35Updated 3 years ago
- Error correction of ONT transcript reads☆58Updated last year
- UCSC Nanopore☆43Updated 5 years ago
- DEPRECATED - Workflow for the comprehensive detection and prioritization of variants in human genomes with PacBio HiFi reads☆38Updated last year
- Human reference genome analysis sets☆51Updated last year
- ENCODE long read RNA-seq pipeline☆45Updated 2 years ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆64Updated this week
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆67Updated 7 months ago
- ☆22Updated 3 years ago
- python plotly Circos from VCF☆34Updated 9 months ago
- Structural variant caller for real-time long-read sequencing data☆56Updated 2 years ago
- Algorithm to detect germline and de novo transposon insertions☆27Updated 11 months ago
- ☆47Updated 7 months ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆53Updated 5 months ago
- Structural variant merging tool☆49Updated 7 months ago
- Somatic structural variant caller for long-read data☆62Updated this week
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆32Updated last year