Illumina / GraphAlignmentViewer
☆35Updated 3 years ago
Alternatives and similar repositories for GraphAlignmentViewer
Users that are interested in GraphAlignmentViewer are comparing it to the libraries listed below
Sorting:
- Public Benchmark of Long-Read Structural Variant Caller on PacBio CCS HG002 Data☆50Updated 4 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆47Updated 4 years ago
- Tools for the analysis of structural variation in genomes☆79Updated last year
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆32Updated last week
- ☆21Updated 3 years ago
- ☆39Updated last year
- Structural Variant Index☆72Updated 5 months ago
- heuristics to merge structural variant calls in VCF format.☆36Updated 8 years ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆105Updated 4 years ago
- TIDDIT - structural variant calling☆73Updated last month
- ☆39Updated 8 months ago
- Set of tools to manipulate and visualize modified base bam files☆55Updated 2 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆32Updated last year
- ☆79Updated 2 months ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆55Updated 7 years ago
- ☆22Updated last month
- Toolkit for calling structural variants using short or long reads☆102Updated this week
- ☆22Updated 3 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆100Updated 3 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆66Updated 2 years ago
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆22Updated 2 years ago
- Data and information about the Polaris study☆53Updated 5 years ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆37Updated 10 months ago
- Error correction of ONT transcript reads☆58Updated last year
- A copy number caller for SMN1 and SMN2 to enable SMA diagnosis and carrier screening with WGS☆49Updated last year
- A tool for genotyping Variable Number Tandem Repeats (VNTR) from sequence data☆44Updated 5 months ago
- Data from the Human PanGenomics Project☆60Updated 3 years ago
- DEPRECATED - Workflow for the comprehensive detection and prioritization of variants in human genomes with PacBio HiFi reads☆38Updated last year
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆47Updated this week